RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 SPSB4Q96A44 273 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 RFT1Q96AA3 541 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 CIDECQ96AQ7 238 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 TM4SF18Q96CE8 201 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 CNRIP1Q96F85 164 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 SNF8Q96H20 258 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 GAFA1Q96PS6 74 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 RAB3IPQ96QF0 476 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 USP28Q96RU2 1077 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 TTC1Q99614 292 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SSX3Q99909 188 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 ADAT1Q9BUB4 502 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 GON7Q9BXV9 100 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 EBPLQ9BY08 206 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 MRPL13Q9BYD1 178 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 ACTRT3Q9BYD9 372 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 MAGT1Q9H0U3 335 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 DHX35Q9H5Z1 703 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 LIN28AQ9H9Z2 209 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 MRPL47Q9HD33 250 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 ISYNA1Q9NPH2 558 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 LIN7CQ9NUP9 197 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 RLIMQ9NVW2 624 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 ALKBH4Q9NXW9 302 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 TECRQ9NZ01 308 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 TAAR3PQ9P1P4 343 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 UVRAGQ9P2Y5 699 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 DNAJB9Q9UBS3 223 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 MRTO4Q9UKD2 239 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 SHOC2Q9UQ13 582 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 RUVBL2Q9Y230 463 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 MRPS28Q9Y2Q9 187 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 SPIN1Q9Y657 262 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 HIVEP2P31629 2446 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 JMJD1CQ15652 2540 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 SYNJ2BP-COX16A0A087WUM0 186 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 IQANK1A0A1B0GTG1 560 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 ZCWPW2A0A1B0GU75 182 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 TEX48A0A1B0GUV7 120 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 TMEM72A0PK05 275 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 GMNCA6NCL1 334 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 BTBD17A6NE02 478 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 TMEM247A6NEH6 219 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 OR6C6A6NF89 314 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 UNC119BA6NIH7 251 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 FAM90A7PA6NKC0 464 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 FAM90A23PA8MXZ1 464 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 H0Y980 276 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 H0YJW9 148 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 SIGLEC5O15389 551 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 CD3EAPO15446 510 aaKnown RBP0.23□□□□□ -2.37
CEP290-203ENST00000547691 MLNRO43193 412 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 AHCYL1O43865 530 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 FCMRO60667 390 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 NOS1APO75052 506 aaPredicted RBP0.23□□□□□ -2.37
CEP290-203ENST00000547691 FKBP6O75344 327 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 WDR47O94967 919 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 SMC2O95347 1197 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 NUDT14O95848 222 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 AK1P00568 194 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 CHRM4P08173 479 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 CST2P09228 141 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 TFPTP0C1Z6 253 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 MLNP12872 115 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 ETS1P14921 441 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 HOXB9P17482 250 aaPredicted RBP0.23□□□□□ -2.37
CEP290-203ENST00000547691 CD247P20963 164 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 FUT3P21217 361 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 GALP22466 123 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 PSMA2P25787 234 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 TACR3P29371 465 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 ERP29P30040 261 aaKnown RBP0.23□□□□□ -2.37
CEP290-203ENST00000547691 BMI1P35226 326 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 MPV17P39210 176 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 BMXP51813 675 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 CDK16Q00536 496 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 SRYQ05066 204 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 ITKQ08881 620 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 GPS1Q13098 491 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 HNF4GQ14541 408 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 MFSD13AQ14CX5 517 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 CD226Q15762 336 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 ZKSCAN8Q15776 578 aaPredicted RBP0.23□□□□□ -2.37
CEP290-203ENST00000547691 EXOC3L4Q17RC7 722 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 EXOC3L2Q2M3D2 409 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 KLHL38Q2WGJ6 581 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 SYT14P1Q58G82 188 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 FAM27D1Q5T7N8 215 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 PRAMEF8Q5VWM4 474 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 PRAMEF7Q5VXH5 474 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 RAET1LQ5VY80 246 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 C18orf63Q68DL7 685 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 LCN12Q6JVE5 192 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 C1orf94Q6P1W5 598 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 FAM173BQ6P4H8 233 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 CD200R1LQ6Q8B3 271 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 LYPD2Q6UXB3 125 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 HACD2Q6Y1H2 254 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 ZBTB49Q6ZSB9 765 aa0.23□□□□□ -2.37
CEP290-203ENST00000547691 CYS1Q717R9 158 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms