RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 SPAG16Q8N0X2 631 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 NOXO1Q8NFA2 376 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 OR52H1Q8NGJ2 320 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 OR1K1Q8NGR3 316 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 OR1L3Q8NH93 324 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 APOBEC4Q8WW27 367 aaKnown RBP5.03□□□□□ -1.6
MRE11-209ENST00000540013 TOMM40LQ969M1 308 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 RPEQ96AT9 228 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 FAF2Q96CS3 445 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 OTUB2Q96DC9 234 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 DNAJC1Q96KC8 554 aaKnown RBP5.03□□□□□ -1.6
MRE11-209ENST00000540013 ZFP3Q96NJ6 502 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 MRPL45Q9BRJ2 306 aaKnown RBP5.03□□□□□ -1.6
MRE11-209ENST00000540013 CSTL1Q9H114 145 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 OR51V1Q9H2C8 321 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 ATP13A3Q9H7F0 1226 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 FGF20Q9NP95 211 aaPredicted RBP5.03□□□□□ -1.6
MRE11-209ENST00000540013 USE1Q9NZ43 259 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 TMCO1Q9UM00 188 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 MRPS28Q9Y2Q9 187 aaKnown RBP5.03□□□□□ -1.6
MRE11-209ENST00000540013 FRYLO94915 3013 aa5.03□□□□□ -1.6
MRE11-209ENST00000540013 CEP192Q8TEP8 1941 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 TRAV19A0A0A6YYK7 116 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 IGLV9-49A0A0B4J1Y8 123 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 TCRBV9S1A1TA0A576 114 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 GOLGA6L10A6NI86 522 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 ERI2A8K979 691 aaKnown RBP5.02□□□□□ -1.61
MRE11-209ENST00000540013 ZNF587BE7ETH6 402 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 H3BMQ9 156 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 CLDN34H7C241 214 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 GOSR2O14653 212 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 HSD17B6O14756 317 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 CTSVO60911 334 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 UGT2B17O75795 530 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 HPP00738 406 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 HLA-DRAP01903 254 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 GPIP06744 558 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 MGMTP16455 207 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 MAGEA6P43360 314 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 CSNK1A1P48729 337 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 CEBPGP53567 150 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 MLF1P58340 268 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 NANOS2P60321 138 aaKnown RBP5.02□□□□□ -1.61
MRE11-209ENST00000540013 ERVK11-1P61568 191 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 ZNF85Q03923 595 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 LTBQ06643 244 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 MADCAM1Q13477 382 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 MED21Q13503 144 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 RUNX3Q13761 415 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 MTF1Q14872 753 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 UNC50Q53HI1 259 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 TTMPQ5BVD1 217 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 OR8G2PQ6IF36 304 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 TMEM207Q6UWW9 146 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 ZNF836Q6ZNA1 936 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 CEACAM19Q7Z692 300 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 IFNEQ86WN2 208 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 ZBED8Q8IZ13 594 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 CMTM1Q8IZ96 169 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 SLC22A15Q8IZD6 547 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 ATP6V0D2Q8N8Y2 350 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 BAALCQ8WXS3 180 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 CPNE4Q96A23 557 aaPredicted RBP5.02□□□□□ -1.61
MRE11-209ENST00000540013 SCMH1Q96GD3 660 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 OVOL2Q9BRP0 275 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 ELOVL4Q9GZR5 314 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 FKRPQ9H9S5 495 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 NMUR1Q9HB89 426 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 PATZ1Q9HBE1 687 aaKnown RBP5.02□□□□□ -1.61
MRE11-209ENST00000540013 ZBTB20Q9HC78 741 aaPredicted RBP5.02□□□□□ -1.61
MRE11-209ENST00000540013 RMND1Q9NWS8 449 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 LSM7Q9UK45 103 aaKnown RBP5.02□□□□□ -1.61
MRE11-209ENST00000540013 TCF19Q9Y242 345 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 CCL26Q9Y258 94 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 DCHS1Q96JQ0 3298 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 DMDP11532 3685 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 PCNX2A6NKB5 2137 aa5.02□□□□□ -1.61
MRE11-209ENST00000540013 ASCC3Q8N3C0 2202 aaKnown RBP5.01□□□□□ -1.61
MRE11-209ENST00000540013 CABIN1Q9Y6J0 2220 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 GOLGA6L4A6NEF3 574 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 SMIM23A6NLE4 172 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 TRDCB7Z8K6 153 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 H0YHG0 523 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 AQP9O43315 295 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 SEMA3DO95025 777 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 ACTL6AO96019 429 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 GP1BAP07359 652 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 TDGF1P13385 188 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 RNH1P13489 461 aaKnown RBP5.01□□□□□ -1.61
MRE11-209ENST00000540013 RPL35AP18077 110 aaKnown RBP5.01□□□□□ -1.61
MRE11-209ENST00000540013 COX5AP20674 150 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 HMGCLP35914 325 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 CXCL12P48061 93 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 DNASE1L1P49184 302 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 RPL14P50914 215 aaKnown RBP5.01□□□□□ -1.61
MRE11-209ENST00000540013 KPNA2P52292 529 aaKnown RBP5.01□□□□□ -1.61
MRE11-209ENST00000540013 POLR2GP62487 172 aaKnown RBP eCLIP5.01□□□□□ -1.61
MRE11-209ENST00000540013 VSNL1P62760 191 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 ZNF33BQ06732 778 aa5.01□□□□□ -1.61
MRE11-209ENST00000540013 PNOCQ13519 176 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms