RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FER1L6-AS2Q96M78 137 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 IL20Q9NYY1 176 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 CHRNA9Q9UGM1 479 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 AK3Q9UIJ7 227 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF816-ZNF321PA0A0X1KG74 233 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 H3BQ06 376 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-208ENST00000538570 M0R2Z0 102 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 TPOP07202 933 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ACHEP22303 614 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 CSN1S1P47710 185 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 EMP3P54852 163 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF600Q6ZNG1 722 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 DOK3Q7L591 496 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF547Q8IVP9 402 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 BOD1Q96IK1 185 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 SLC35E1Q96K37 410 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 UBQLN3Q9H347 655 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 CGGBP1Q9UFW8 167 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-208ENST00000538570 CSAG2Q9Y5P2 127 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 NPFFR2Q9Y5X5 522 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 G3V3Y1 287 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 SIAH2O43255 324 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 OR2F2O95006 317 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ADH4P08319 380 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 KIR2DS4P43632 304 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 EPHA5P54756 1037 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 TPPP2P59282 170 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 OR2F1Q13607 317 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 KIR2DS1Q14954 304 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ZBTB37Q5TC79 503 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 Q6ZSR9 355 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 MARCH3Q86UD3 253 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 PFN4Q8NHR9 129 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 NEURL2Q9BR09 285 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ARFGEF2Q9Y6D5 1785 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 AQP7P3A6NL99 342 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 GPR171O14626 319 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ST8SIA3O43173 380 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ADRA2CP18825 462 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 C1orf140Q5VVS0 124 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 MFSD12Q6NUT3 480 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 FAM173AQ9BQD7 235 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ADAMTS5Q9UNA0 930 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 HS3ST2Q9Y278 367 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 PRAMEF25A6NGN4 478 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ACOT8O14734 319 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 SLC31A2O15432 143 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 GZMKP49863 264 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 LYRM7Q5U5X0 104 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 H1FNTQ75WM6 255 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-208ENST00000538570 PGBD5Q8N414 524 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 BPIFCQ8NFQ6 507 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 OR2AE1Q8NHA4 323 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 CRYGNQ8WXF5 182 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 STACQ99469 402 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 C1QTNF3Q9BXJ4 246 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 TWSG1Q9GZX9 223 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 TOPAZ1Q8N9V7 1692 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 RAB29O14966 203 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 EFSO43281 561 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 CTXN2P0C2S0 81 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 TEAD1P28347 426 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 GJA4P35212 333 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 PIGAP37287 484 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 DEFB103AP81534 67 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 THNSL2Q86YJ6 484 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 GABRG1Q8N1C3 465 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 CISD2Q8N5K1 135 aaKnown RBP9.11□□□□□ -0.95
COL4A6-208ENST00000538570 TMEM178AQ8NBL3 297 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 ADPRHL1Q8NDY3 354 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 OR2G2Q8NGZ5 317 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 APH1BQ8WW43 257 aa9.11□□□□□ -0.95
COL4A6-208ENST00000538570 TRAF4Q9BUZ4 470 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-208ENST00000538570 GDF2Q9UK05 429 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-208ENST00000538570 COA3Q9Y2R0 106 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-208ENST00000538570 DNAJC25-GNG10A0A024R161 153 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 OR5H15A6NDH6 313 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 OR5H14A6NHG9 310 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 OR5H1A6NKK0 313 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 CHEK1O14757 476 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 HS3ST1O14792 307 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 CTNSO60931 367 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 EDN1P05305 212 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 SELEP16581 610 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 SULT1A2P50226 295 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 MANEAQ5SRI9 462 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 TMEM64Q6YI46 380 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 OR5B3Q8NH48 314 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ARRDC3Q96B67 414 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 APH1AQ96BI3 265 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 RTL8AQ9BWD3 113 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 RIMS4Q9H426 269 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-208ENST00000538570 BANF2Q9H503 90 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 TAPBPO15533 448 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 CT45A10P0DMU9 189 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 GLB1P16278 677 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 MLF1P58340 268 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 RPL27P61353 136 aaKnown RBP9.1□□□□□ -0.95
COL4A6-208ENST00000538570 SEMA3BQ13214 749 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms