RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SELENOHQ8IZQ5 122 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 GCNT2Q8N0V5 402 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 LRRC17Q8N6Y2 441 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 RELL2Q8NC24 303 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 OR10J5Q8NHC4 309 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 RNF128Q8TEB7 428 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 STARD4Q96DR4 205 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 MRPL48Q96GC5 212 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 GMPPAQ96IJ6 420 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 ZNF48Q96MX3 618 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 FUZQ9BT04 418 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 SFXN3Q9BWM7 321 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 CHST11Q9NPF2 352 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 GSN-AS1Q9NRJ2 163 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 DCAF13Q9NV06 445 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 COA4Q9NYJ1 87 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 JKAMPQ9P055 326 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 ING1Q9UK53 422 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 POU2F3Q9UKI9 436 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 KIAA1549Q9HCM3 1950 aa5.56□□□□□ -1.52
ATPAF1-209ENST00000529214 DIDO1Q9BTC0 2240 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 USP9XQ93008 2570 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 IGKV1D-42A0A075B6H8 117 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 IGHV3-15A0A0B4J1V0 119 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 A0A1B0GV90 55 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 A0A1W2PQ09 198 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 SMIM30A4D0T7 59 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 TRAPPC13A5PLN9 417 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 NKX2-6A6NCS4 301 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 LIPT2A6NK58 231 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 CPSF4LA6NMK7 179 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 A8MV72 311 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 C19orf84I3L1E1 186 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 TCAPO15273 167 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 HSPA12AO43301 675 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 CHP2O43745 196 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 OR2T1O43869 369 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 SS18L1O75177 396 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 MED6O75586 246 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 LYPD3O95274 346 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 SERPINA1P01009 418 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 SERPINA3P01011 423 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 GPIP06744 558 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 YES1P07947 543 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 LYNP07948 512 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 PRF1P14222 555 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 KLK2P20151 261 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 TNFRSF1BP20333 461 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 RAB6AP20340 208 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 COL8A1P27658 744 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 SLC6A9P48067 706 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 CEBPGP53567 150 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 OR2B6P58173 313 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 SLC35A1P78382 337 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 PUDPQ08623 228 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 PDK3Q15120 406 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 FBXL19-AS1Q494R0 122 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 SFRP5Q5T4F7 317 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 DDI2Q5TDH0 399 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 C1orf140Q5VVS0 124 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 CYB5R2Q6BCY4 276 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 VWA1Q6PCB0 445 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 PAQR6Q6TCH4 344 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 VTCN1Q7Z7D3 282 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 BIVMQ86UB2 503 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 DMRTC2Q8IXT2 367 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 GPR137CQ8N3F9 429 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 Q8N3U1 123 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 POMGNT2Q8NAT1 580 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 ACBD4Q8NC06 268 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 MFSD8Q8NHS3 518 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 ABHD3Q8WU67 409 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 ST8SIA2Q92186 375 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 TAAR8Q969N4 342 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 FAM162AQ96A26 154 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 S100PBPQ96BU1 408 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 SLC7A6OSQ96CW6 309 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 ZHX1-C8orf76Q96EF9 292 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 DNAJA3Q96EY1 480 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 C14orf79Q96F83 325 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 PRSS27Q9BQR3 290 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 NAA11Q9BSU3 229 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 PTDSS2Q9BVG9 487 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 AMBRA1Q9C0C7 1298 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 POLR2J2Q9GZM3 115 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 ENKD1Q9H0I2 346 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 POLR2J3Q9H1A7 115 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 PIGMQ9H3S5 423 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 SLA2Q9H6Q3 261 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 RANBP3Q9H6Z4 567 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 RNPEPL1Q9HAU8 725 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 BCO1Q9HAY6 547 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 MYOZ1Q9NP98 299 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 MRPL15Q9P015 296 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 FKBP7Q9Y680 259 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 ARHGAP21Q5T5U3 1957 aa5.55□□□□□ -1.52
ATPAF1-209ENST00000529214 PCNX1Q96RV3 2341 aa5.54□□□□□ -1.52
ATPAF1-209ENST00000529214 ZNF724A8MTY0 619 aa5.54□□□□□ -1.52
ATPAF1-209ENST00000529214 FAM25AB3EWG3 89 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms