RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 IFT27Q9BW83 186 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 PLA2G12AQ9BZM1 189 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 IL1RAPQ9NPH3 570 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 RPRD1BQ9NQG5 326 aaKnown RBP9.02□□□□□ -0.97
NELFE-213ENST00000494956 DECR2Q9NUI1 292 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 B9D1Q9UPM9 204 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 IGLV1-36A0A0B4J1U3 117 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 IFNA2P01563 188 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 TFP02787 698 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 GAAP10253 952 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 SRD5A1P18405 259 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 ANOS1P23352 680 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 FPR3P25089 353 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 CRYBB2P43320 205 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 TMEM33P57088 247 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 SMIM11AP58511 58 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 SCRN3Q0VDG4 424 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 AQP6Q13520 282 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 HLXQ14774 488 aaPredicted RBP9.01□□□□□ -0.97
NELFE-213ENST00000494956 CLEC12AQ5QGZ9 265 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 LYPD4Q6UWN0 246 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 SYT9Q86SS6 491 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 JAZF1Q86VZ6 243 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 OR5AS1Q8N127 324 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 CYB561A3Q8NBI2 242 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 OR8D4Q8NGM9 314 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 GNPDA2Q8TDQ7 276 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 ZNRF4Q8WWF5 429 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 HPS1Q92902 700 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 CMBLQ96DG6 245 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 C1orf159Q96HA4 380 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 NDEL1Q9GZM8 345 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 SAP30LQ9HAJ7 183 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 ELOVL3Q9HB03 270 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 KRCC1Q9NPI7 259 aaPredicted RBP9.01□□□□□ -0.97
NELFE-213ENST00000494956 PTTG3PQ9NZH4 202 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 LPAR3Q9UBY5 353 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 TMEFF2Q9UIK5 374 aaPredicted RBP9.01□□□□□ -0.97
NELFE-213ENST00000494956 GPR160Q9UJ42 338 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 KLHL21Q9UJP4 597 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 NDRG4Q9ULP0 352 aaKnown RBP9.01□□□□□ -0.97
NELFE-213ENST00000494956 POLR1DQ9Y2S0 133 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 WIPI2Q9Y4P8 454 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 LYVE1Q9Y5Y7 322 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 LHFPL6Q9Y693 200 aa9.01□□□□□ -0.97
NELFE-213ENST00000494956 IGHV3-64DA0A0J9YX35 117 aa9□□□□□ -0.97
NELFE-213ENST00000494956 PLSCR5A0PG75 271 aa9□□□□□ -0.97
NELFE-213ENST00000494956 OR6C68A6NDL8 312 aa9□□□□□ -0.97
NELFE-213ENST00000494956 OR6C6A6NF89 314 aa9□□□□□ -0.97
NELFE-213ENST00000494956 TNFRSF11BO00300 401 aa9□□□□□ -0.97
NELFE-213ENST00000494956 AHCYL1O43865 530 aa9□□□□□ -0.97
NELFE-213ENST00000494956 TIMM8AO60220 97 aaPredicted RBP9□□□□□ -0.97
NELFE-213ENST00000494956 ICMTO60725 284 aa9□□□□□ -0.97
NELFE-213ENST00000494956 GASTP01350 101 aa9□□□□□ -0.97
NELFE-213ENST00000494956 COX5BP10606 129 aa9□□□□□ -0.97
NELFE-213ENST00000494956 PSKH1P11801 424 aa9□□□□□ -0.97
NELFE-213ENST00000494956 SLC6A6P31641 620 aa9□□□□□ -0.97
NELFE-213ENST00000494956 PYCR1P32322 319 aa9□□□□□ -0.97
NELFE-213ENST00000494956 RPS27P42677 84 aaKnown RBP9□□□□□ -0.97
NELFE-213ENST00000494956 ARHGDIAP52565 204 aa9□□□□□ -0.97
NELFE-213ENST00000494956 LSM6P62312 80 aaKnown RBP9□□□□□ -0.97
NELFE-213ENST00000494956 MRPS11P82912 194 aaKnown RBP9□□□□□ -0.97
NELFE-213ENST00000494956 RSPO1Q2MKA7 263 aaPredicted RBP9□□□□□ -0.97
NELFE-213ENST00000494956 PCGF3Q3KNV8 242 aa9□□□□□ -0.97
NELFE-213ENST00000494956 KRTAP24-1Q3LI83 254 aa9□□□□□ -0.97
NELFE-213ENST00000494956 ZNF620Q6ZNG0 422 aa9□□□□□ -0.97
NELFE-213ENST00000494956 CFAP77Q6ZQR2 320 aa9□□□□□ -0.97
NELFE-213ENST00000494956 ADCK1Q86TW2 530 aa9□□□□□ -0.97
NELFE-213ENST00000494956 NAA40Q86UY6 237 aa9□□□□□ -0.97
NELFE-213ENST00000494956 OR52E2Q8NGJ4 325 aa9□□□□□ -0.97
NELFE-213ENST00000494956 OR4C15Q8NGM1 316 aa9□□□□□ -0.97
NELFE-213ENST00000494956 OR1F12Q8NHA8 337 aa9□□□□□ -0.97
NELFE-213ENST00000494956 CCL17Q92583 94 aa9□□□□□ -0.97
NELFE-213ENST00000494956 WDR76Q9H967 626 aa9□□□□□ -0.97
NELFE-213ENST00000494956 NKIRAS2Q9NYR9 191 aa9□□□□□ -0.97
NELFE-213ENST00000494956 ACTR3BQ9P1U1 418 aa9□□□□□ -0.97
NELFE-213ENST00000494956 PURGQ9UJV8 347 aaKnown RBP9□□□□□ -0.97
NELFE-213ENST00000494956 TMCC3Q9ULS5 477 aa9□□□□□ -0.97
NELFE-213ENST00000494956 U3KQV3 271 aa9□□□□□ -0.97
NELFE-213ENST00000494956 ATRQ13535 2644 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 TVP23AA6NH52 213 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 H0YL77 283 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 ARPC3O15145 178 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 DEAF1O75398 565 aaPredicted RBP8.99□□□□□ -0.97
NELFE-213ENST00000494956 UBOX5O94941 541 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 SOX14O95416 240 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 RENP00797 406 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 AVPP01185 164 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 NOS3P29474 1203 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 DVL1P1P54792 670 aaPredicted RBP8.99□□□□□ -0.97
NELFE-213ENST00000494956 TNFAIP6P98066 277 aaPredicted RBP8.99□□□□□ -0.97
NELFE-213ENST00000494956 TEKQ02763 1124 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.99□□□□□ -0.97
NELFE-213ENST00000494956 TSPAN31Q12999 210 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 KCNMB1Q16558 191 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 MOGQ16653 247 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 HFEQ30201 348 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 MTX3Q5HYI7 312 aa8.99□□□□□ -0.97
NELFE-213ENST00000494956 ZNF770Q6IQ21 691 aaPredicted RBP8.99□□□□□ -0.97
NELFE-213ENST00000494956 CCDC197Q8NCU1 140 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms