RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 TEKQ02763 1124 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 MSMPQ1L6U9 139 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 CCDC121Q6ZUS5 278 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 VASH1Q7L8A9 365 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-213ENST00000460211 LRP11Q86VZ4 500 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 PROKR2Q8NFJ6 384 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 OR8D4Q8NGM9 314 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 OR2AJ1Q8NGZ0 328 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 OR1F12Q8NHA8 337 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 C10orf105Q8TEF2 133 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 IPCEF1Q8WWN9 437 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-213ENST00000460211 COG8Q96MW5 612 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 TEX12Q9BXU0 123 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 TUBG2Q9NRH3 451 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 TBCCD1Q9NVR7 557 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 ARMC1Q9NVT9 282 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 ATPIF1Q9UII2 106 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 GRIP1Q9Y3R0 1128 aa12.82□□□□□ -0.36
ATG4B-213ENST00000460211 SONP18583 2426 aaKnown RBP12.81□□□□□ -0.36
ATG4B-213ENST00000460211 IGLV3-9A0A075B6K5 115 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 OR6C6A6NF89 314 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 RNF212BA8MTL3 300 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 H3BSA7 217 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 RER1O15258 196 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 ICMTO60725 284 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 GAAP10253 952 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 DAOP14920 347 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 WNT5AP41221 380 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 ALDH3B1P43353 468 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 ERFP50548 548 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 ERVS71-1P61550 626 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 PPP1CBP62140 327 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 KRTAP1-1Q07627 177 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 TMEM154Q6P9G4 183 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 ZCCHC24Q8N2G6 241 aaKnown RBP12.81□□□□□ -0.36
ATG4B-213ENST00000460211 ATG16L2Q8NAA4 619 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 CYB561A3Q8NBI2 242 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 SLC37A3Q8NCC5 494 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 SLC26A10Q8NG04 563 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 UBASH3BQ8TF42 649 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 DNAJC9Q8WXX5 260 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 NRBF2Q96F24 287 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 DCLRE1CQ96SD1 692 aaKnown RBP12.81□□□□□ -0.36
ATG4B-213ENST00000460211 HDHD2Q9H0R4 259 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 TPK1Q9H3S4 243 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 FN3KQ9H479 309 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 HINT3Q9NQE9 182 aaKnown RBP12.81□□□□□ -0.36
ATG4B-213ENST00000460211 KCNG2Q9UJ96 466 aa12.81□□□□□ -0.36
ATG4B-213ENST00000460211 CUBNO60494 3623 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 PLSCR5A0PG75 271 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 GPANK1O95872 356 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 CLPTM1O96005 669 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 IGFBP1P08833 259 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-213ENST00000460211 ZNF3P17036 446 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 POU1F1P28069 291 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 LIPAP38571 399 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 RGS6P49758 472 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 BLVRAP53004 296 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 LOXL1Q08397 574 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-213ENST00000460211 ECH1Q13011 328 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 MAD2L1BPQ15013 274 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-213ENST00000460211 MEP1BQ16820 701 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 PCGF3Q3KNV8 242 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 CCDC92Q53HC0 331 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-213ENST00000460211 ELFN2Q5R3F8 820 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 MBNL2Q5VZF2 373 aaKnown RBP12.8□□□□□ -0.36
ATG4B-213ENST00000460211 OTPQ5XKR4 325 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 SLC27A4Q6P1M0 643 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 TMEM179BQ7Z7N9 219 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 ZNF101Q8IZC7 436 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 OR5L1Q8NGL2 311 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 OR4Q3Q8NH05 313 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 SLC25A40Q8TBP6 338 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 SLCO4A1Q96BD0 722 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 DDOQ99489 341 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 PITX2Q99697 317 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 COQ7Q99807 217 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 CYSLTR2Q9NS75 346 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 KIF17Q9P2E2 1029 aa12.8□□□□□ -0.36
ATG4B-213ENST00000460211 MYEF2Q9P2K5 600 aaKnown RBP12.8□□□□□ -0.36
ATG4B-213ENST00000460211 C17orf100A8MU93 164 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 J3QW42 95 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 EBAG9O00559 213 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 TIPRLO75663 272 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 IGHV3-13P01766 116 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 TFP02787 698 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 HMGN1P05114 100 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 NAT2P11245 290 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 FCGR1AP12314 374 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 OSMP13725 252 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 PAICSP22234 425 aaKnown RBP12.79□□□□□ -0.36
ATG4B-213ENST00000460211 USF1P22415 310 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-213ENST00000460211 FASP25445 335 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 FMO3P31513 532 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 PYCR1P32322 319 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 GRK5P34947 590 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 SLC25A1P53007 311 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 CRMP1Q14194 572 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 ALKBH6Q3KRA9 238 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 ZNF362Q5T0B9 420 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms