RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ZNF250P15622 560 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 FOLR3P41439 243 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 THBS3P49746 956 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 CATR1Q13166 79 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 C2orf76Q3KRA6 126 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 FAM27D1Q5T7N8 215 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 LILRA3Q8N6C8 439 aaPredicted RBP17.97■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM229BQ8NBD8 167 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 OR52B4Q8NGK2 314 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 DERL3Q96Q80 235 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 ABHD6Q9BV23 337 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 PLEKHB1Q9UF11 243 aaPredicted RBP17.97■□□□□ 0.47
SHANK1-203ENST00000391813 ALOX5APP20292 161 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 SNRPEP62304 92 aaKnown RBP17.97■□□□□ 0.47
SHANK1-203ENST00000391813 GPNMBQ14956 572 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 ANKRD16Q6P6B7 361 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 OR2W3Q7Z3T1 314 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 ZNF761Q86XN6 746 aaPredicted RBP17.97■□□□□ 0.47
SHANK1-203ENST00000391813 ZNF485Q8NCK3 441 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 SECTM1Q8WVN6 248 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 CABLES2Q9BTV7 478 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 PARP12Q9H0J9 701 aaKnown RBP17.97■□□□□ 0.47
SHANK1-203ENST00000391813 RD3LP0DJH9 198 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 CDONQ4KMG0 1287 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 IGSF11Q5DX21 431 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 COL13A1Q5TAT6 717 aaPredicted RBP17.96■□□□□ 0.47
SHANK1-203ENST00000391813 ABHD17BQ5VST6 288 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 PLCXD3Q63HM9 321 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 NPSR1Q6W5P4 371 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 OR6S1Q8NH40 331 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 ZDHHC5Q9C0B5 715 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 MBP02144 154 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 LIMS3P0CW19 117 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 LIMS4P0CW20 117 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 FGF7P21781 194 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 CDK5Q00535 292 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 IFITM3Q01628 133 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 HNF4GQ14541 408 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM182Q6ZP80 229 aaPredicted RBP17.96■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM217Q8N7C4 229 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 IL1F10Q8WWZ1 152 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 NANOS1Q8WY41 292 aaKnown RBP17.96■□□□□ 0.47
SHANK1-203ENST00000391813 BTBD17A6NE02 478 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 TRAPPC2LH3BP13 241 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 EPHA4P54764 986 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 C15orf54Q8N8G6 183 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 PSMF1Q92530 271 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 PCDHGA1Q9Y5H4 931 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 HLA-DOBP13765 273 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 OTX2P32243 289 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 SHEQ5VZ18 495 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 BVESQ8NE79 360 aa17.96■□□□□ 0.47
SHANK1-203ENST00000391813 KIAA1551Q9HCM1 1747 aa17.96■□□□□ 0.46
SHANK1-203ENST00000391813 PLPP2O43688 288 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 RNLSQ5VYX0 342 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 OR2T2Q6IF00 324 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 CACNA1CQ13936 2221 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 PHOX2AO14813 284 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 ATF1P18846 271 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 ZNF750Q32MQ0 723 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 AADACL3Q5VUY0 350 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 PPP1R3BQ86XI6 285 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 SLC35A4Q96G79 324 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 ENKD1Q9H0I2 346 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 KCNIP2Q9NS61 270 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 CHRNA9Q9UGM1 479 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 ANKRD30BLA7E2S9 258 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 WNT1P04628 370 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 MFAP5Q13361 173 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 EXD3Q8N9H8 876 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 SEMA6DQ8NFY4 1073 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 AKR7LQ8NHP1 331 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 NKX3-1Q99801 234 aaPredicted RBP17.95■□□□□ 0.46
SHANK1-203ENST00000391813 ARV1Q9H2C2 271 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 IL21Q9HBE4 155 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 TAS2R4Q9NYW5 299 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 LRP5LA4QPB2 252 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 PDGFBP01127 241 aaPredicted RBP17.95■□□□□ 0.46
SHANK1-203ENST00000391813 P04436 131 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 BCL6P41182 706 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 CD300LDQ6UXZ3 194 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 ASH2LQ9UBL3 628 aa17.95■□□□□ 0.46
SHANK1-203ENST00000391813 LOC107986453A0A1B0GWG9 222 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 TMPRSS11DO60235 418 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 HOXA1P49639 335 aaPredicted RBP17.94■□□□□ 0.46
SHANK1-203ENST00000391813 HYAL1Q12794 435 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 KIAA0040Q15053 153 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 TESK1Q15569 626 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 MSI2Q96DH6 328 aaKnown RBP17.94■□□□□ 0.46
SHANK1-203ENST00000391813 LINC00052Q96N35 136 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 EVPLQ92817 2033 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 A8MVM7 634 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 HRO43593 1189 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 IGLV3-27P01718 113 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 SFTA3P0C7M3 94 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 SCAND1P57086 179 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 ENDOGQ14249 297 aaKnown RBP17.94■□□□□ 0.46
SHANK1-203ENST00000391813 MANEAQ5SRI9 462 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 PRR18Q8N4B5 295 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 OR5D18Q8NGL1 313 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms