RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 TCP10LQ8TDR4 215 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 DOK4Q8TEW6 326 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 PIK3R3Q92569 461 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 TMBIM1Q969X1 311 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 EXOSC8Q96B26 276 aaKnown RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 C18orf12Q96KH6 178 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 PPP3R2Q96LZ3 170 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZFP3Q96NJ6 502 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 AMDHD1Q96NU7 426 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 COL21A1Q96P44 957 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 VGLL1Q99990 258 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 CABLES2Q9BTV7 478 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 OSBPL11Q9BXB4 747 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 UGT2B28Q9BY64 529 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 IQCGQ9H095 443 aaKnown RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 TUBB1Q9H4B7 451 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 GLIPR2Q9H4G4 154 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 REEP4Q9H6H4 257 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 METTL7AQ9H8H3 244 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 CALHM2Q9HA72 323 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 FOLH1BQ9HBA9 442 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 C3orf14Q9HBI5 128 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 LRTM1Q9HBL6 345 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 EML4Q9HC35 981 aaKnown RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 MCCC2Q9HCC0 563 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 KCNJ16Q9NPI9 418 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 MIEF1Q9NQG6 463 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 GIN1Q9NXP7 522 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 SPRR3Q9UBC9 169 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 KCNN3Q9UGI6 736 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ATP6V1HQ9UI12 483 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 MRTO4Q9UKD2 239 aaKnown RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ABCG2Q9UNQ0 655 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 WIF1Q9Y5W5 379 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 CSMD2Q7Z408 3487 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 CSMD1Q96PZ7 3565 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ROS1P08922 2347 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 CELSR1Q9NYQ6 3014 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 A0A1W2PQD3 144 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 MEX3AA1L020 520 aaKnown RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 TMEM114B3SHH9 223 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 B4DXG7 233 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 TM9SF1O15321 606 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 BIRC5O15392 142 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 EMC8O43402 210 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 CRCPO75575 148 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 LYPLA1O75608 230 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 REM1O75628 298 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 TRAPPC6AO75865 159 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 RCBTB2O95199 551 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 GOSR1O95249 250 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 HSPA4LO95757 839 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 CRHP06850 196 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 CHRNGP07510 517 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 BPGMP07738 259 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PRPS2P11908 318 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 BCKDHAP12694 445 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF708P17019 499 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 RPL35AP18077 110 aaKnown RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 SDC1P18827 310 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 IL12BP29460 328 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 NTSP30990 170 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 GCKP35557 465 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 NCBP2P52298 156 aaKnown RBP eCLIP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF136P52737 540 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 SLC18A1P54219 525 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 DIO3P55073 304 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 XGP55808 180 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 DSCR4P56555 118 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 KRTAP10-12P60413 245 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 CYCSP99999 105 aaKnown RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 MZT1Q08AG7 82 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 IFFO1Q0D2I5 559 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 RCAN2Q14206 197 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 GANABQ14697 944 aaKnown RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 OPCMLQ14982 345 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNHIT3Q15649 155 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 NNATQ16517 81 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 VPS26BQ4G0F5 336 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 RFTN2Q52LD8 501 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 EIPR1Q53HC9 387 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 KRBOX4Q5JUW0 171 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 C6orf136Q5SQH8 315 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM219BQ5XKK7 198 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 CLEC6AQ6EIG7 209 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 ANGPTL8Q6UXH0 198 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 NPSR1Q6W5P4 371 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 LRRTM1Q86UE6 522 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 RIMKLAQ8IXN7 391 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PRR22Q8IZ63 422 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM89BQ8N5H3 189 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 CDRT4Q8N9R6 151 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 RELL2Q8NC24 303 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM83FQ8NEG4 500 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR5M9Q8NGP3 310 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 GOT1L1Q8NHS2 421 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM110BQ8TC76 370 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 TWIST2Q8WVJ9 160 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 GTF3AQ92664 365 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms