RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 CLEC3BP05452 202 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 GRPP07492 148 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 SRP14P37108 136 aaKnown RBP10.89□□□□□ -0.67
NEK9-210ENST00000557026 SMAD2Q15796 467 aaKnown RBP10.89□□□□□ -0.67
NEK9-210ENST00000557026 DEGS2Q6QHC5 323 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 LINC00346Q8IVM7 164 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 MRPS24Q96EL2 167 aaKnown RBP10.89□□□□□ -0.67
NEK9-210ENST00000557026 GABARAPL1Q9H0R8 117 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 LPAR3Q9UBY5 353 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 SLCO1B1Q9Y6L6 691 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 RGPD2P0DJD1 1756 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 P2RY10O00398 339 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 SSX4O60224 188 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 GASTP01350 101 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 APEHP13798 732 aaKnown RBP10.89□□□□□ -0.67
NEK9-210ENST00000557026 PNLIPRP3Q17RR3 467 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 C16orf52Q8NHV5 167 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 SECTM1Q8WVN6 248 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 GHSRQ92847 366 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 COA3Q9Y2R0 106 aaPredicted RBP10.89□□□□□ -0.67
NEK9-210ENST00000557026 TMA7Q9Y2S6 64 aaKnown RBP10.89□□□□□ -0.67
NEK9-210ENST00000557026 LRP5O75197 1615 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 LOXHD1Q8IVV2 1947 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 SLX4Q8IY92 1834 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 G3V3Y1 287 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 TAAR5O14804 337 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 SORBS2O94875 1100 aaKnown RBP10.89□□□□□ -0.67
NEK9-210ENST00000557026 CLDN1O95832 211 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 ALDOCP09972 364 aaKnown RBP10.89□□□□□ -0.67
NEK9-210ENST00000557026 TGM4P49221 684 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 RAB7AP51149 207 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.89□□□□□ -0.67
NEK9-210ENST00000557026 GLIPR1L1Q6UWM5 242 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 ABI3BPQ7Z7G0 1075 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 ACBD4Q8NC06 268 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 OR13G1Q8NGZ3 307 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 SERTAD4Q9NUC0 356 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 SMIM30A4D0T7 59 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 CD3EP07766 207 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 HOXC5Q00444 222 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 FUT7Q11130 342 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 DOC2BQ14184 412 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 RHBDD2Q6NTF9 364 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 DRAM2Q6UX65 266 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 SF3B5Q9BWJ5 86 aaKnown RBP10.89□□□□□ -0.67
NEK9-210ENST00000557026 COMMD5Q9GZQ3 224 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 WDR54Q9H977 334 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 PLCXD1Q9NUJ7 323 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 EBF1Q9UH73 591 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 R4GMQ9 66 aa10.89□□□□□ -0.67
NEK9-210ENST00000557026 PRSS37A4D1T9 235 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 C1orf196B1AJZ1 125 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 SSX5O60225 188 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 OR2J2O76002 312 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 OPN1LWP04000 364 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 HFEQ30201 348 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 TIGITQ495A1 244 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 PRAMEF5Q5TYX0 476 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 PRAMEF6Q5VXH4 476 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 ETFRF1Q6IPR1 90 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 MEX3DQ86XN8 651 aaKnown RBP10.88□□□□□ -0.67
NEK9-210ENST00000557026 OR2A1Q8NGT9 310 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 ZC3HAV1LQ96H79 300 aaKnown RBP10.88□□□□□ -0.67
NEK9-210ENST00000557026 SLC6A17Q9H1V8 727 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 EXOSC3Q9NQT5 275 aaKnown RBP10.88□□□□□ -0.67
NEK9-210ENST00000557026 TUBG2Q9NRH3 451 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 CA10Q9NS85 328 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 NPAP1Q9NZP6 1156 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 ZNF705EA8MWA4 302 aaPredicted RBP10.88□□□□□ -0.67
NEK9-210ENST00000557026 CDK2AP1O14519 115 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 NARSO43776 548 aaKnown RBP10.88□□□□□ -0.67
NEK9-210ENST00000557026 GMDSO60547 372 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 TUSC2O75896 110 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 GABRB3P28472 473 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 BSGP35613 385 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 ETV5P41161 510 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 ZNF85Q03923 595 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 KHDC1LQ5JSQ8 128 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 OR2T11Q8NH01 316 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 SSX3Q99909 188 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 ANKRD61A6NGH8 418 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 FAM183AA6NL82 134 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 LINC01565O15544 149 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 GP1BAP07359 652 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 HLA-DOBP13765 273 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 MMP11P24347 488 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 SERPINF1P36955 418 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 ACKR1Q16570 336 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 HES3Q5TGS1 186 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 ACSM5Q6NUN0 579 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 ASCL5Q7RTU5 278 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 GALNT16Q8N428 558 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 PLPP5Q8NEB5 264 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 OR2AK2Q8NG84 335 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 CHAC2Q8WUX2 184 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 RND1Q92730 232 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 RASD2Q96D21 266 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 GAL3ST2Q9H3Q3 398 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 THYN1Q9P016 225 aa10.88□□□□□ -0.67
NEK9-210ENST00000557026 MYH4Q9Y623 1939 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms