RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 SYNPO2LQ9H987 977 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 OR2S2Q9NQN1 319 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 RCE1Q9Y256 329 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 GPR52Q9Y2T5 361 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 GPR55Q9Y2T6 319 aaPredicted RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 R4GMQ9 66 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 LRRC37AA6NMS7 1700 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 MRPL33O75394 65 aaKnown RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 PLATP00750 562 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 CD1AP06126 327 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 RPS26P62854 115 aaKnown RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 H3F3AP84243 136 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 SORDQ00796 357 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 ID2Q02363 134 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 ATXN7L3Q14CW9 347 aaPredicted RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 STEAP3Q658P3 488 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 DLEU7Q6UYE1 221 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 Q8IYB0 196 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 CHST14Q8NCH0 376 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 UBTD1Q9HAC8 227 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 CRLF2Q9HC73 371 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 IL20RAQ9UHF4 553 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 MBPP02686 304 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 PRF1P14222 555 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 LIM2P55344 173 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 IKZF1Q13422 519 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 GAB1Q13480 694 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ODF4Q2M2E3 257 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 RNF175Q8N4F7 328 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 WDR34Q96EX3 536 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 IL17FQ96PD4 163 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 LMF1Q96S06 567 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ULBP2Q9BZM5 246 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 B3GALT5Q9Y2C3 310 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 YTHDF2Q9Y5A9 579 aaKnown RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF705FA8MVS1 300 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 CD3EP07766 207 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF705DP0CH99 300 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF705BP0CI00 300 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 F2RL1P55085 397 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 MAP4K2Q12851 820 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 POU4F3Q15319 338 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ELAVL1Q15717 326 aaKnown RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 MOGAT2Q3SYC2 334 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 MAVSQ7Z434 540 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 LINC00596Q86U02 117 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 OR13C8Q8NGS7 320 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 PDXPQ96GD0 296 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 INSM2Q96T92 566 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 NUDT16L1Q9BRJ7 211 aaKnown RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 UQCC2Q9BRT2 126 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 TAF9BQ9HBM6 251 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 YARS2Q9Y2Z4 477 aaKnown RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 MYH11P35749 1972 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 A1L4Q6 167 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 LMO7DNF2Z398 122 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 GABRR1P24046 479 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 SSX1Q16384 188 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 FXNQ16595 210 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 C12orf73Q69YU5 71 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 TFAP2EQ6VUC0 442 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 SIAH3Q8IW03 269 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF845Q96IR2 970 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 MRGPRX4Q96LA9 322 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 DCLRE1CQ96SD1 692 aaKnown RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 CITED2Q99967 270 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 C7orf72A4D263 438 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 SSX5O60225 188 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 CRYAAP02489 173 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 TFAP2AP05549 437 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 CBLP22681 906 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 PTAFRP25105 342 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 OPRM1P35372 400 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 SELENBP1Q13228 472 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 TMEM41BQ5BJD5 291 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 VASNQ6EMK4 673 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ABHD17CQ6PCB6 329 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 FCRLAQ7L513 359 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ABI3BPQ7Z7G0 1075 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 NHLRC2Q8NBF2 726 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 OR13H1Q8NG92 308 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 OR1M1Q8NGA1 313 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 OR4F15Q8NGB8 312 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 OR10K1Q8NGX5 313 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 APH1BQ8WW43 257 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 TSLPQ969D9 159 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 CSF3RQ99062 836 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 SLC16A7O60669 478 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 OR1D5P58170 312 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 SLC35A2P78381 396 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 HNF4GQ14541 408 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 AGERQ15109 404 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF77Q15935 545 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 RNF212Q495C1 297 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 PDLIM3Q53GG5 364 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-211ENST00000543710 C9orf152Q5JTZ5 239 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 BTNL8Q6UX41 500 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 SLC16A14Q7RTX9 510 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 MITD1Q8WV92 249 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 GAL3ST1Q99999 423 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms