RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 C1orf53Q5VUE5 145 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 AWAT2Q6E213 333 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 NPSR1Q6W5P4 371 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 C2CD4CQ8TF44 421 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 WNT2BQ93097 391 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 LPAR4Q99677 370 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 NRIP2Q9BQI9 281 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 ACKR4Q9NPB9 350 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 CYTL1Q9NRR1 136 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 SERGEFQ9UGK8 458 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 CSAG2Q9Y5P2 127 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 F13BP05160 661 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 RPL18Q07020 188 aaKnown RBP15.84■□□□□ 0.13
RAB40C-205ENST00000539661 MEP1BQ16820 701 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 RNF44Q7L0R7 432 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 SHISA5Q8N114 240 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 FAM174AQ8TBP5 190 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 ASB5Q8WWX0 329 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 AQP3Q92482 292 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 DCUN1D4Q92564 292 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 AMELYQ99218 206 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 ZNF251Q9BRH9 671 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 KCNG2Q9UJ96 466 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 H7C1C5 153 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 EML2O95834 649 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 S100A9P06702 114 aaKnown RBP15.84■□□□□ 0.13
RAB40C-205ENST00000539661 AVPR2P30518 371 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 SLC6A9P48067 706 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 LCN6P62502 163 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 ECH1Q13011 328 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 MST1LQ2TV78 715 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 CDNFQ49AH0 187 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 LRRC69Q6ZNQ3 347 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 SLC17A9Q9BYT1 436 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 EGLN1Q9GZT9 426 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 LRIT1Q9P2V4 623 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 LPAR3Q9UBY5 353 aa15.84■□□□□ 0.13
RAB40C-205ENST00000539661 COLCA2A8K830 154 aa15.83■□□□□ 0.13
RAB40C-205ENST00000539661 CTNNB1P35222 781 aa15.83■□□□□ 0.13
RAB40C-205ENST00000539661 PTGFRP43088 359 aa15.83■□□□□ 0.13
RAB40C-205ENST00000539661 ROM1Q03395 351 aa15.83■□□□□ 0.13
RAB40C-205ENST00000539661 SMAD2Q15796 467 aaKnown RBP15.83■□□□□ 0.13
RAB40C-205ENST00000539661 VITQ6UXI7 678 aa15.83■□□□□ 0.13
RAB40C-205ENST00000539661 MISPQ8IVT2 679 aa15.83■□□□□ 0.13
RAB40C-205ENST00000539661 MRGPRFQ96AM1 343 aa15.83■□□□□ 0.13
RAB40C-205ENST00000539661 NUDT9Q9BW91 350 aa15.83■□□□□ 0.13
RAB40C-205ENST00000539661 FGF22Q9HCT0 170 aa15.83■□□□□ 0.13
RAB40C-205ENST00000539661 MRPS18BQ9Y676 258 aaKnown RBP15.83■□□□□ 0.13
RAB40C-205ENST00000539661 A0A1W2PP55 124 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 PRSS38A1L453 326 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 EEF1E1-BLOC1S5C9J1V9 151 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 SCAMP1O15126 338 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 STK17BO94768 372 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 F12P00748 615 aaPredicted RBP15.83■□□□□ 0.12
RAB40C-205ENST00000539661 FABP1P07148 127 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 LIPCP11150 499 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 RPS27P42677 84 aaKnown RBP15.83■□□□□ 0.12
RAB40C-205ENST00000539661 CENPAP49450 140 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 PGDP52209 483 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 TAS2R31P59538 309 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 PDGFRLQ15198 375 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 NKPD1Q17RQ9 610 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 PRRT3Q5FWE3 981 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 C1orf100Q5SVJ3 147 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 CORO6Q6QEF8 472 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 RHOUQ7L0Q8 258 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 CD163Q86VB7 1156 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 OR4C3Q8NH37 302 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 CRB3Q9BUF7 120 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 SELENOIQ9C0D9 397 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 SYT4Q9H2B2 425 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 TAS2R4Q9NYW5 299 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 PCOLCE2Q9UKZ9 415 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 SLC22A13Q9Y226 551 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 TMED7Q9Y3B3 224 aa15.83■□□□□ 0.12
RAB40C-205ENST00000539661 LOC390937A0A1W2PQ73 354 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 METTL21EPA6NDL7 271 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 EFSO43281 561 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 CSN2P05814 226 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 TBPP20226 339 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 CAV2P51636 162 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 OR7A5Q15622 319 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.82■□□□□ 0.12
RAB40C-205ENST00000539661 GFOD2Q3B7J2 385 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 KLHL26Q53HC5 615 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 SLC18B1Q6NT16 456 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 C15orf54Q8N8G6 183 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 OR4S1Q8NGB4 309 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 TMED6Q8WW62 240 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 OIT3Q8WWZ8 545 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 CMKLR1Q99788 373 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 SMCO4Q9NRQ5 59 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 CFAP54Q96N23 3096 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 CPED1A4D0V7 1026 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 C5orf51A6NDU8 294 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 TMEM235A6NFC5 223 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 OR2W5A6NFC9 320 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 ZNF705EA8MWA4 302 aaPredicted RBP15.82■□□□□ 0.12
RAB40C-205ENST00000539661 MAOAP21397 527 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 HABP2Q14520 560 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms