RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 Q5PR19 223 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 PRSS57Q6UWY2 283 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 VASH1Q7L8A9 365 aaPredicted RBP19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 WFDC11Q8NEX6 87 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 PROKR2Q8NFJ6 384 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 TRMT61AQ96FX7 289 aaKnown RBP19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 PKP2Q99959 881 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 PLK3Q9H4B4 646 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 SLC25A19Q9HC21 320 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 MRPL22Q9NWU5 206 aaKnown RBP19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 CMAHPQ9Y471 501 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 LHFPL6Q9Y693 200 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 CELSR1Q9NYQ6 3014 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 C5orf49A4QMS7 147 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 VSTM5A8MXK1 200 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 B9A039 149 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 SGCEO43556 437 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 MITFO75030 526 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 NDUFS7O75251 213 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 FAM157BP0CG42 384 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 COX5BP10606 129 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 CLUP10909 449 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 ZNF3P17036 446 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 WNT5AP41221 380 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 RPS23P62266 143 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 HIST1H3AP68431 136 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 HIST2H3PS2Q5TEC6 136 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 KDM4DQ6B0I6 523 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 HIST2H3AQ71DI3 136 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 OR51L1Q8NGJ5 315 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 MRPL24Q96A35 216 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 OAZ3Q9UMX2 235 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 POLR1DQ9Y2S0 133 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 HIVEP1P15822 2718 aa19.57■□□□□ 0.72
SFSWAP-204ENST00000535399 H7C417 338 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 RER1O15258 196 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 SURF4O15260 269 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 DOK2O60496 412 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 IGHV4-39P01824 125 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 HLA-DQA2P01906 255 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 HMGN1P05114 100 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 GYPBP06028 91 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 SPI1P17947 270 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 CCNOP22674 350 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 GGT2P36268 569 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 CRISP1P54107 249 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 UCP2P55851 309 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 SNRPD2P62316 118 aaKnown RBP19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 TMEM236Q5W0B7 351 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 CORO6Q6QEF8 472 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 LYPD4Q6UWN0 246 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 TGIF2LYQ8IUE0 185 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 C10orf67Q8IYJ2 551 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 OR10H5Q8NGA6 315 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 DOK1Q99704 481 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 HCAR1Q9BXC0 346 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 OR51B6Q9H340 312 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 PLEK2Q9NYT0 353 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 GDF2Q9UK05 429 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 VPS13CQ709C8 3753 aa19.56■□□□□ 0.72
SFSWAP-204ENST00000535399 F8P00451 2351 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 OR6C6A6NF89 314 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 SAC3D1A6NKF1 404 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 FAM183AA6NL82 134 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 SYNGR3O43761 229 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 HTR5AP47898 357 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 SLC18B1Q6NT16 456 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 PTP4A1Q93096 173 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 MRPL37Q9BZE1 423 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 BCL2L14Q9BZR8 327 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 MED20Q9H944 212 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 KRT84Q9NSB2 600 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 CYB5R1Q9UHQ9 305 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 TMEFF2Q9UIK5 374 aaPredicted RBP19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 NDRG4Q9ULP0 352 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 PMF1-BGLAPU3KQ54 211 aa19.55■□□□□ 0.72
SFSWAP-204ENST00000535399 TVP23AA6NH52 213 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 BMP4P12644 408 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 RAD52P43351 418 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 ERVS71-1P61550 626 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 ESRRGP62508 458 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 RAB35Q15286 201 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 LINC01590Q5TEZ4 76 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 LINC00346Q8IVM7 164 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 ZNF101Q8IZC7 436 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 ICA1LQ8NDH6 482 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 GJC3Q8NFK1 279 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 OR1F12Q8NHA8 337 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 S100A14Q9HCY8 104 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 KCNG2Q9UJ96 466 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 FZR1Q9UM11 496 aa19.54■□□□□ 0.72
SFSWAP-204ENST00000535399 ICMTO60725 284 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 PSKH1P11801 424 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 EVX1P49640 407 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 PPP2R2BQ00005 443 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 PTGES3Q15185 160 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 RGS7BPQ6MZT1 257 aaPredicted RBP19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 CFAP77Q6ZQR2 320 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 LRP11Q86VZ4 500 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 ZNF511Q8NB15 262 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms