RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 VSNL1P62760 191 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 H3F3AP84243 136 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 CDK6Q00534 326 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 PUDPQ08623 228 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 BST1Q10588 318 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 SCARB2Q14108 478 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 NPTX1Q15818 432 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 DCAF12L2Q5VW00 463 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 FAM219BQ5XKK7 198 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 FAM91A1Q658Y4 838 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 ACSM5Q6NUN0 579 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 WDR93Q6P2C0 686 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 PGBD2Q6P3X8 592 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 TMEM65Q6PI78 240 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZNF788Q6ZQV5 615 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 IL17RELQ6ZVW7 336 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 OLIG3Q7RTU3 272 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 SLC16A14Q7RTX9 510 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 PIWIL3Q7Z3Z3 882 aaKnown RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 BCDIN3DQ7Z5W3 292 aaKnown RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 SERPINA11Q86U17 422 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 MDP1Q86V88 176 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 PHC2Q8IXK0 858 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 C1orf174Q8IYL3 243 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 KDM8Q8N371 416 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZNF786Q8N393 782 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 PNLDC1Q8NA58 520 aaKnown RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 C11orf65Q8NCR3 313 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 RBM15BQ8NDT2 890 aaKnown RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 FAM71CQ8NEG0 241 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 NFKBIDQ8NI38 313 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 NANPQ8TBE9 248 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 SYNPRQ8TBG9 265 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 FNDC8Q8TC99 324 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 SLC38A5Q8WUX1 472 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZNF75CPQ92670 426 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 MSI2Q96DH6 328 aaKnown RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 ELMOD3Q96FG2 381 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZNF385AQ96PM9 386 aaKnown RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 RBP7Q96R05 134 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 GAL3ST1Q99999 423 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 TMEM109Q9BVC6 243 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 RBM4Q9BWF3 364 aaKnown RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 BCL2L14Q9BZR8 327 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 SLC38A1Q9H2H9 487 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 WDR55Q9H6Y2 383 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 SAP30LQ9HAJ7 183 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 NTN4Q9HB63 628 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 LPAR2Q9HBW0 351 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 A4GALTQ9NPC4 353 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 KRCC1Q9NPI7 259 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 TCF7L2Q9NQB0 619 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 HINT3Q9NQE9 182 aaKnown RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 NANSQ9NR45 359 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 CYSLTR2Q9NS75 346 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 CCDC167Q9P0B6 97 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 NDUFAF1Q9Y375 327 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 COX11Q9Y6N1 276 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 USH1CQ9Y6N9 552 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 V9GYY5 206 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 MED12Q93074 2177 aa3.24□□□□□ -1.89
HMGN1P11-201ENST00000508668 HRNRQ86YZ3 2850 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 A0A087WUJ7 227 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 LRRC30A6NM36 301 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 BLOC1S5-TXNDC5H3BN57 136 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 KPNA4O00629 521 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 XKRYO14609 159 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 TYROBPO43914 113 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 FMO6PO60774 539 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 UPK3AO75631 287 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 SEC14L2O76054 403 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 TNFRSF6BO95407 300 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 TGDSO95455 350 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 PNPP00491 289 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 HLA-HP01893 362 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 MSMBP08118 114 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 GSTM3P21266 225 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 IGFBP5P24593 272 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 GLRXP35754 106 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 CDKN2CP42773 168 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 CENPAP49450 140 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 EVX1P49640 407 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 RAD23AP54725 363 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 BIDP55957 195 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 MAGOHP61326 146 aaKnown RBP3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 RUNX1T1Q06455 604 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 CD47Q08722 323 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 CHD3Q12873 2000 aaKnown RBP3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 CYLC2Q14093 348 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 RGNQ15493 299 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 MAPRE2Q15555 327 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 ADIPOQQ15848 244 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 SGCAQ16586 387 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 TSTQ16762 297 aaKnown RBP3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 ALKBH6Q3KRA9 238 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZNF718Q3SXZ3 478 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 AGKQ53H12 422 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 AWAT1Q58HT5 328 aa3.23□□□□□ -1.89
HMGN1P11-201ENST00000508668 TTMPQ5BVD1 217 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 672.4 ms