RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 FAM157CP0CG43 387 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 ACHEP22303 614 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 GUCA1AP43080 201 aaPredicted RBP9.04□□□□□ -0.96
NELFE-213ENST00000494956 CENPAP49450 140 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 ERFP50548 548 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 SELENOVP59797 346 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 KRT72Q14CN4 511 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 CR1LQ2VPA4 569 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 C1orf94Q6P1W5 598 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 TMEM154Q6P9G4 183 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 RINLQ6ZS11 566 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 USP51Q70EK9 711 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 CXXC5Q7LFL8 322 aaKnown RBP9.04□□□□□ -0.96
NELFE-213ENST00000494956 ZDHHC21Q8IVQ6 265 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 FANK1Q8TC84 345 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 FNDC8Q8TC99 324 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 KLF14Q8TD94 323 aaPredicted RBP9.04□□□□□ -0.96
NELFE-213ENST00000494956 SNX33Q8WV41 574 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 C4orf45Q96LM5 186 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 SAMD8Q96LT4 415 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 ERMAPQ96PL5 475 aaPredicted RBP9.04□□□□□ -0.96
NELFE-213ENST00000494956 CCT8L2Q96SF2 557 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 GPX7Q96SL4 187 aaPredicted RBP9.04□□□□□ -0.96
NELFE-213ENST00000494956 OR52D1Q9H346 318 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 MSL2Q9HCI7 577 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 TMEM160Q9NX00 188 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 EIF3KQ9UBQ5 218 aaKnown RBP9.04□□□□□ -0.96
NELFE-213ENST00000494956 CDC42EP3Q9UKI2 254 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 CUBNO60494 3623 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 ARHGAP32A7KAX9 2087 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 TANC2Q9HCD6 1990 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 DYSFO75923 2080 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 C12orf71A8MTZ7 269 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 B2RBV5 119 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 RER1O15258 196 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 TPD52L2O43399 206 aaKnown RBP9.03□□□□□ -0.96
NELFE-213ENST00000494956 SGCEO43556 437 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 OR10H3O60404 316 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 KHDRBS3O75525 346 aaKnown RBP9.03□□□□□ -0.96
NELFE-213ENST00000494956 DCTN3O75935 186 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 IGHV3-13P01766 116 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 ITGA2P17301 1181 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 GCH1P30793 250 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 HTR5AP47898 357 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 ZNF81P51508 661 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 MMP15P51511 669 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 CDH15P55291 814 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 MS4A2Q01362 244 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 ZNF718Q3SXZ3 478 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 CCDC92Q53HC0 331 aaPredicted RBP9.03□□□□□ -0.96
NELFE-213ENST00000494956 SLC35F1Q5T1Q4 408 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 LEG1Q6P5S2 330 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 CORO6Q6QEF8 472 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 SMARCD3Q6STE5 483 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 C16orf89Q6UX73 402 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 DPY19L2P2Q6ZN68 376 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 VASH1Q7L8A9 365 aaPredicted RBP9.03□□□□□ -0.96
NELFE-213ENST00000494956 PHC2Q8IXK0 858 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 ALDH16A1Q8IZ83 802 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 OR9Q2Q8NGE9 314 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 OR4K13Q8NH42 304 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 NMNAT3Q96T66 252 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 RACGAP1Q9H0H5 632 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 EGLN3Q9H6Z9 239 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 SRA1Q9HD15 236 aaKnown RBP9.03□□□□□ -0.96
NELFE-213ENST00000494956 DCAF16Q9NXF7 216 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 VNN3Q9NY84 501 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 SLCO1C1Q9NYB5 712 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 PLEK2Q9NYT0 353 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 VSX1Q9NZR4 365 aaPredicted RBP9.03□□□□□ -0.96
NELFE-213ENST00000494956 ASH2LQ9UBL3 628 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 STARD10Q9Y365 291 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 GRIP1Q9Y3R0 1128 aa9.03□□□□□ -0.96
NELFE-213ENST00000494956 IGHV1-69-2A0A0G2JMI3 117 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 TCRBV5S2A0A599 114 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 RNF212BA8MTL3 300 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 PHF1O43189 567 aaPredicted RBP9.02□□□□□ -0.97
NELFE-213ENST00000494956 ABHD16AO95870 558 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 TXNDC12O95881 172 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 T-ENOLP0DO92 83 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 HIST1H1CP16403 213 aaKnown RBP9.02□□□□□ -0.97
NELFE-213ENST00000494956 GSSP48637 474 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 RPS6KA3P51812 740 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 PCBD1P61457 104 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 LMO4P61968 165 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 PSG7Q13046 419 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 RFX4Q33E94 735 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 MBNL2Q5VZF2 373 aaKnown RBP9.02□□□□□ -0.97
NELFE-213ENST00000494956 GPR139Q6DWJ6 353 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 PGBD2Q6P3X8 592 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 Q6ZR03 302 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 LINC00346Q8IVM7 164 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 GLB1L2Q8IW92 636 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 OR6V1Q8N148 313 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 LINC01356Q8N9X3 169 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 SDR9C7Q8NEX9 313 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 MCUR1Q96AQ8 359 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 NSL1Q96IY1 281 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 CLPTM1LQ96KA5 538 aa9.02□□□□□ -0.97
NELFE-213ENST00000494956 BTBD10Q9BSF8 475 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms