RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CXXC5Q7LFL8 322 aaKnown RBP9.62□□□□□ -0.87
APTX-230ENST00000494649 SSX8Q7RTT4 187 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 DNAJC9Q8WXX5 260 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 UBE2FQ969M7 185 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 NMNAT2Q9BZQ4 307 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 SLC25A19Q9HC21 320 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 CA10Q9NS85 328 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 NKX1-2Q9UD57 310 aaPredicted RBP9.62□□□□□ -0.87
APTX-230ENST00000494649 AASSQ9UDR5 926 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 TIMM10BQ9Y5J6 103 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 COMMD3-BMI1R4GMX3 469 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 SGCEO43556 437 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 HMGN1P05114 100 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 MRPL3P09001 348 aaKnown RBP9.62□□□□□ -0.87
APTX-230ENST00000494649 ZNF823P16415 610 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 PAICSP22234 425 aaKnown RBP9.62□□□□□ -0.87
APTX-230ENST00000494649 APLNRP35414 380 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 NAA10P41227 235 aaPredicted RBP9.62□□□□□ -0.87
APTX-230ENST00000494649 HTR5AP47898 357 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 FABP6P51161 128 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 GALK2Q01415 458 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 AQP6Q13520 282 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 ERI1Q8IV48 349 aaKnown RBP9.62□□□□□ -0.87
APTX-230ENST00000494649 ZNF101Q8IZC7 436 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 SNX18Q96RF0 628 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 C9orf16Q9BUW7 83 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 TEX12Q9BXU0 123 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 TOR3AQ9H497 397 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 CDH20Q9HBT6 801 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 ORC6Q9Y5N6 252 aa9.62□□□□□ -0.87
APTX-230ENST00000494649 DSCAMO60469 2012 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 USF3Q68DE3 2245 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 MAP1AP78559 2803 aaPredicted RBP9.61□□□□□ -0.87
APTX-230ENST00000494649 H0YHG0 523 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 SELENOFO60613 162 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 GOSR1O95249 250 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 ATE1O95260 518 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 RAF1P04049 648 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 ZNF35P13682 527 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 CD53P19397 219 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 FMO3P31513 532 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 THBS4P35443 961 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 GGT2P36268 569 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 HCCSP53701 268 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 PCBD1P61457 104 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 APOFQ13790 326 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 MSMPQ1L6U9 139 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 TBC1D28Q2M2D7 210 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 CCDC92Q53HC0 331 aaPredicted RBP9.61□□□□□ -0.87
APTX-230ENST00000494649 LINC01590Q5TEZ4 76 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 SLX4IPQ5VYV7 408 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 VASH1Q7L8A9 365 aaPredicted RBP9.61□□□□□ -0.87
APTX-230ENST00000494649 ALDH16A1Q8IZ83 802 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 OR6N2Q8NGY6 317 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 FAM81AQ8TBF8 368 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 PERPQ96FX8 193 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 MBOAT4Q96T53 435 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 GABARAPL3Q9BY60 117 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 TTTY10Q9BZA0 68 aa9.61□□□□□ -0.87
APTX-230ENST00000494649 GDF2Q9UK05 429 aaPredicted RBP9.61□□□□□ -0.87
APTX-230ENST00000494649 ZNF593O00488 134 aaPredicted RBP9.6□□□□□ -0.87
APTX-230ENST00000494649 APOL3O95236 402 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 LCKP06239 509 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 OR4A8P0C604 315 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 TTKP33981 857 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 WNT5AP41221 380 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 GDI2P50395 445 aaKnown RBP9.6□□□□□ -0.87
APTX-230ENST00000494649 SLC25A1P53007 311 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 LSM6P62312 80 aaKnown RBP9.6□□□□□ -0.87
APTX-230ENST00000494649 SCRN3Q0VDG4 424 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 ALKBH6Q3KRA9 238 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 SLC18B1Q6NT16 456 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 DCXRQ7Z4W1 244 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 MUC15Q8N387 334 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 ZNF611Q8N823 705 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 FAM169BQ8N8A8 192 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 OR2AJ1Q8NGZ0 328 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 MAP6Q96JE9 813 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 PITX2Q99697 317 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 SYT3Q9BQG1 590 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 GRIP1Q9Y3R0 1128 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 AKAP9Q99996 3911 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 NDUFS7O75251 213 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 NGFP01138 241 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 CD8AP01732 235 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 DANCRP0C864 163 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 NR4A1P22736 598 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 DNASE1P24855 282 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 PRSS12P56730 875 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 ADIPOQQ15848 244 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 C12orf73Q69YU5 71 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 DPY19L4Q7Z388 723 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 LRP11Q86VZ4 500 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 ZCCHC24Q8N2G6 241 aaKnown RBP9.6□□□□□ -0.87
APTX-230ENST00000494649 POM121L2Q96KW2 1035 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 DHRS9Q9BPW9 319 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 USE1Q9NZ43 259 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 DNAJC27Q9NZQ0 273 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 CYB5R1Q9UHQ9 305 aa9.6□□□□□ -0.87
APTX-230ENST00000494649 DUSP13Q9UII6 198 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms