RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ZNHIT6Q9NWK9 470 aaKnown RBP2.83□□□□□ -1.96
SMNDC1-205ENST00000477763 CCDC59Q9P031 241 aaKnown RBP2.83□□□□□ -1.96
SMNDC1-205ENST00000477763 CTSFQ9UBX1 484 aa2.83□□□□□ -1.96
SMNDC1-205ENST00000477763 PSME2Q9UL46 239 aa2.83□□□□□ -1.96
SMNDC1-205ENST00000477763 VANGL2Q9ULK5 521 aa2.83□□□□□ -1.96
SMNDC1-205ENST00000477763 KCNE3Q9Y6H6 103 aa2.83□□□□□ -1.96
SMNDC1-205ENST00000477763 WDR19Q8NEZ3 1342 aa2.83□□□□□ -1.96
SMNDC1-205ENST00000477763 MTCL1Q9Y4B5 1905 aaKnown RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 IGLV4-60A0A075B6I1 120 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 IGKV2-28A0A075B6P5 120 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 GOLGA6L7A0A1B0GV03 622 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 LINC00854A0A1B0GVQ3 168 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 OR2AG2A6NM03 316 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 RSPH10B2B2RC85 870 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 CASC3O15234 703 aaKnown RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 NUPL2O15504 423 aaKnown RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 SPOPO43791 374 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 CACNG3O60359 315 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 HUS1O60921 280 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 ZNF324O75467 553 aaPredicted RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 OR2F2O95006 317 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 CTDNEP1O95476 244 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 IGKV2D-28P01615 120 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 BCHEP06276 602 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 RSPH10BP0C881 870 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 OR5H8P0DN80 308 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 ZNF823P16415 610 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 IGFBP3P17936 291 aaPredicted RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 DCKP27707 260 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 GTF2E2P29084 291 aaKnown RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 CSNK1EP49674 416 aaKnown RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 EIF3EP60228 445 aaKnown RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 RPS15P62841 145 aaKnown RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 MERTKQ12866 999 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 QPRTQ15274 297 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 CHRNA6Q15825 494 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 DUX4L9Q6RFH8 374 aaPredicted RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 NCCRP1Q6ZVX7 275 aaPredicted RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 BIVMQ86UB2 503 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 ABHD3Q8WU67 409 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 TSEN15Q8WW01 171 aaKnown RBP2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 HMG20AQ9NP66 347 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 TTC41PQ6P2S7 1318 aa2.82□□□□□ -1.96
SMNDC1-205ENST00000477763 TRBV9A0A0B4J1U6 114 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 H7C0C1 242 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 POLR3GO15318 223 aaPredicted RBP2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 FKBP6O75344 327 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 FGFR1OPO95684 399 aaKnown RBP2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 PAHP00439 452 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 CEACAM3P40198 252 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 MRPL19P49406 292 aaKnown RBP2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 LIPEQ05469 1076 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 SELENBP1Q13228 472 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 RGNQ15493 299 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 PGGHGQ32M88 737 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 ALKBH6Q3KRA9 238 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 NANOGP8Q6NSW7 305 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 DNAJC24Q6P3W2 148 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 EIF3MQ7L2H7 374 aaKnown RBP2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 SCD5Q86SK9 330 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 C15orf56Q8N910 161 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 FAM184AQ8NB25 1140 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 OR10G2Q8NGC3 310 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 NTAN1Q96AB6 310 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 EEF1AKMT3Q96AZ1 226 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 ECHDC3Q96DC8 303 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 DUS3LQ96G46 650 aaKnown RBP2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 ZNF681Q96N22 645 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 MICU1Q9BPX6 476 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 TMEM165Q9HC07 324 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 TMEM9BQ9NQ34 198 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 LYARQ9NX58 379 aaKnown RBP2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 TRMT112Q9UI30 125 aaKnown RBP2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 SCN2AQ99250 2005 aa2.81□□□□□ -1.96
SMNDC1-205ENST00000477763 ARID1AO14497 2285 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 IGLV1-50A0A075B6I6 118 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 IGHV5-10-1A0A0J9YXX1 117 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 A0A1B0GVX0 72 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 BET1O15155 118 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 EIF3HO15372 352 aaKnown RBP eCLIP2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 B4GALT5O43286 388 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 CHST1O43916 411 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 CDC40O60508 579 aaKnown RBP eCLIP2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 EIF4E2O60573 245 aaKnown RBP2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 CLDN11O75508 207 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 S100A9P06702 114 aaKnown RBP2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 SERPINE2P07093 398 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 FGF4P08620 206 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 TPM1P09493 284 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 POLR2MP0CAP2 368 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 IGHV1-8P0DP01 117 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 PSMC3P17980 439 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 ZNF138P52744 262 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 PSMD5Q16401 504 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 FAM83EQ2M2I3 478 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 AADACL4Q5VUY2 407 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 METTL21CQ5VZV1 264 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 IGFL3Q6UXB1 125 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 MBOAT1Q6ZNC8 495 aa2.8□□□□□ -1.96
SMNDC1-205ENST00000477763 SSX9Q7RTT3 188 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms