RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 GALP22466 123 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 STOMP27105 288 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 ACVR1BP36896 505 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 MTNR1AP48039 350 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 CARD18P57730 90 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 RAP1BP61224 184 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 RAP1AP62834 184 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 PMP22Q01453 160 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 RAB40BQ12829 278 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF273Q14593 569 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 SLC35D3Q5M8T2 416 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 PDSS1Q5T2R2 415 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 VASNQ6EMK4 673 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 LEG1Q6P5S2 330 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 PAMR1Q6UXH9 720 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 UNQ6494/PRO21346Q6UXR6 183 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 JAZF1Q86VZ6 243 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 UEVLDQ8IX04 471 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 KDM8Q8N371 416 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 CYB561A3Q8NBI2 242 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 OR10D3Q8NH80 312 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 ASB10Q8WXI3 467 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 CPNE4Q96A23 557 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-202ENST00000324340 TEAD3Q99594 435 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 SF3B5Q9BWJ5 86 aaKnown RBP11.36□□□□□ -0.59
DDX39A-202ENST00000324340 BEX2Q9BXY8 128 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 SRXN1Q9BYN0 137 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 MED20Q9H944 212 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 FGF20Q9NP95 211 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-202ENST00000324340 EXOSC4Q9NPD3 245 aaKnown RBP11.36□□□□□ -0.59
DDX39A-202ENST00000324340 VSX1Q9NZR4 365 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-202ENST00000324340 EXOGQ9Y2C4 368 aaKnown RBP11.36□□□□□ -0.59
DDX39A-202ENST00000324340 TRGV5A0A0B4J1U4 118 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 A0A1B0GVC2 190 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 ABCD4O14678 606 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 SMAD9O15198 467 aaKnown RBP11.35□□□□□ -0.59
DDX39A-202ENST00000324340 FABP7O15540 132 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 TRAF3IP2O43734 574 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-202ENST00000324340 RAMP1O60894 148 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 LALBAP00709 142 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 IFNGR1P15260 489 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 KLK2P20151 261 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 AZGP1P25311 298 aaKnown RBP11.35□□□□□ -0.59
DDX39A-202ENST00000324340 SNRPD2P62316 118 aaKnown RBP11.35□□□□□ -0.59
DDX39A-202ENST00000324340 POU3F1Q03052 451 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-202ENST00000324340 GGTLC2Q14390 218 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 TMEM225Q6GV28 225 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 Q8N402 240 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 ZPLD1Q8TCW7 415 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 RNFT2Q96EX2 444 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 ABHD17AQ96GS6 310 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 JAM3Q9BX67 310 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 TSPAN10Q9H1Z9 355 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-202ENST00000324340 IFT46Q9NQC8 304 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 KLHL13Q9P2N7 655 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 PRELID3BQ9Y3B1 194 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 LIPGQ9Y5X9 500 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 NCOR2Q9Y618 2525 aa11.35□□□□□ -0.59
DDX39A-202ENST00000324340 ARPC4-TTLL3A0A0A6YYG9 625 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 hCG_1807616A0A1W2PRN6 198 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 PRSS37A4D1T9 235 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 NPIPA5E9PKD4 350 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 J3QRE1 110 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 XKRYO14609 159 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 CXCL13O43927 109 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 CDRT1O95170 752 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 RENP00797 406 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 ADRA2AP08913 450 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 CLUP10909 449 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 CPN1P15169 458 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF250P15622 560 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 SPI1P17947 270 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 SLC6A1P30531 599 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 INPP1P49441 399 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 HOXA1P49639 335 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-202ENST00000324340 EVX1P49640 407 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 TPBGQ13641 420 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 SLC17A1Q14916 467 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 EEF1A1P5Q5VTE0 462 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 ABLIM2Q6H8Q1 611 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 SIAH3Q8IW03 269 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 PHC2Q8IXK0 858 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 EIF4E3Q8N5X7 224 aaKnown RBP11.34□□□□□ -0.59
DDX39A-202ENST00000324340 MEIOBQ8N635 442 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 UXS1Q8NBZ7 420 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 OR52I1Q8NGK6 324 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 ST8SIA4Q92187 359 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 EXTL1Q92935 676 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 UPRTQ96BW1 309 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 TRMT61AQ96FX7 289 aaKnown RBP11.34□□□□□ -0.59
DDX39A-202ENST00000324340 TAAR6Q96RI8 345 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 UCN2Q96RP3 112 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 KCNK17Q96T54 332 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 TIMP4Q99727 224 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 C7orf50Q9BRJ6 194 aaKnown RBP11.34□□□□□ -0.59
DDX39A-202ENST00000324340 MRPL13Q9BYD1 178 aaKnown RBP11.34□□□□□ -0.59
DDX39A-202ENST00000324340 DEFB127Q9H1M4 99 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 OR51V1Q9H2C8 321 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms