RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 OPRM1P35372 400 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 RPL4P36578 427 aaKnown RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 AQP2P41181 271 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 PCYT1AP49585 367 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 DAPP51397 102 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 POU3F1Q03052 451 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 FOXD4Q12950 439 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 PPP1R8Q12972 351 aaKnown RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 STK11Q15831 433 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 C1QTNF12Q5T7M4 302 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 SLC27A4Q6P1M0 643 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 ANKRD16Q6P6B7 361 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 KLHL17Q6TDP4 642 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 CREB3L2Q70SY1 520 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 OVCH2Q7RTZ1 564 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 GALNT5Q7Z7M9 940 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 ADCK1Q86TW2 530 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 GPAT4Q86UL3 456 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 HS3ST5Q8IZT8 346 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 ZIC4Q8N9L1 334 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 LRRC75AQ8NAA5 344 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 C9orf106Q8NAJ2 232 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 OR2T33Q8NG76 320 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 OR6K3Q8NGY3 331 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 OR51A7Q8NH64 312 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 OR6X1Q8NH79 312 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 MOSPD2Q8NHP6 518 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 TEX47Q8TBZ9 253 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 FNDC8Q8TC99 324 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 ABHD3Q8WU67 409 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 ROBO4Q8WZ75 1007 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 RND1Q92730 232 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 INTS12Q96CB8 462 aaKnown RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 LRR1Q96L50 414 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 SNX18Q96RF0 628 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 NIPSNAP1Q9BPW8 284 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 PRRG3Q9BZD7 231 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 OR52D1Q9H346 318 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 TXNIPQ9H3M7 391 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 PIGMQ9H3S5 423 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 SMURF2Q9HAU4 748 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 SLC25A19Q9HC21 320 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 NRIP3Q9NQ35 241 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 GRHPRQ9UBQ7 328 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 NKX1-2Q9UD57 310 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 SEC14L4Q9UDX3 406 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 TINAGQ9UJW2 476 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 MAGED1Q9Y5V3 778 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 FLVCR1Q9Y5Y0 555 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 FLNCQ14315 2725 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 A0A087WWL8 130 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 IGHV3-15A0A0B4J1V0 119 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 A1L4Q6 167 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF726A6NNF4 738 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 RIIAD1A6NNX1 92 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 MCIDASD6RGH6 385 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 H3BN98 237 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 M0R3G1 203 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 PDLIM1O00151 329 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 CCL21O00585 134 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 BHLHE40O14503 412 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 SOCS2O14508 198 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 XKRYO14609 159 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ZNHIT1O43257 154 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 RAMP1O60894 148 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 MRPL33O75394 65 aaKnown RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 TNFSF13O75888 250 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 TUSC2O75896 110 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF432O94892 652 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 TOXO94900 526 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 BCL10O95999 233 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 HMGN1P05114 100 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 TMIGD3P0DMS9 266 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 KLK2P20151 261 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 GNLYP22749 145 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 PEX2P28328 305 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 CHRNB4P30926 498 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 GRK5P34947 590 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 OR3A2P47893 321 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 HSPA13P48723 471 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 RPS6KA3P51812 740 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 SMSP52788 366 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 CRISP1P54107 249 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 FXYD6P3P58550 94 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 RPL27P61353 136 aaKnown RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 IL1RL1Q01638 556 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 PMPCAQ10713 525 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 NPRL3Q12980 569 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 P2RY6Q15077 328 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 IGFBP7Q16270 282 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ACKR1Q16570 336 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ZIK1Q3SY52 487 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 SLC36A3Q495N2 470 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ARMC4Q5T2S8 1044 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 SUMO4Q6EEV6 95 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 SLC35D2Q76EJ3 337 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 FAM122BQ7Z309 247 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ABHD12BQ7Z5M8 362 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 MEX3DQ86XN8 651 aaKnown RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 TMEM123Q8N131 208 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms