RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 TRBV11-1A0A0K0K1C0 115 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 CASKO14936 926 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 MPZL2O60487 215 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 LYPD3O95274 346 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 CNR1P21554 472 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 PAX6P26367 422 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 CRABP1P29762 137 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 CDC42P60953 191 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 GINS1Q14691 196 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 C10orf91Q5T1B1 145 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 SLC30A6Q6NXT4 461 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 CASP12Q6UXS9 341 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 TCEANCQ8N8B7 351 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 PIGXQ8TBF5 258 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 ACOT11Q8WXI4 607 aaPredicted RBP16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 UBL7Q96S82 380 aaPredicted RBP16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 C19orf12Q9NSK7 152 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 CARHSP1Q9Y2V2 147 aaKnown RBP16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 PTRH2Q9Y3E5 179 aaKnown RBP16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 CNTRLQ7Z7A1 2325 aa16.42■□□□□ 0.22
POLR2J3-205ENST00000489144 A0A1W2PNU3 283 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 A0A1W2PPE3 182 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 ARRDC5A6NEK1 342 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 ZNF593O00488 134 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 CRTAPO75718 401 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 CPEP16870 476 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 ADCYAP1P18509 176 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 GALNSP34059 522 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 NUTF2P61970 127 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 INSM1Q01101 510 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 ZNF141Q15928 474 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 MEDAGQ5VYS4 303 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 CMIPQ8IY22 773 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 SUMF1Q8NBK3 374 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 LOXL4Q96JB6 756 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 RPS6KB2Q9UBS0 482 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 ZNF292O60281 2723 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 MPDZO75970 2070 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 FRG2CA6NGY1 282 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 PPIHO43447 177 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 PRKYO43930 277 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 KHDRBS3O75525 346 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 TMEM11P17152 192 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 DDTP30046 118 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 IL11RAQ14626 422 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 ALG10BQ5I7T1 473 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 LYPD4Q6UWN0 246 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 MOB3CQ70IA8 216 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 OR5J2Q8NH18 312 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 GATAD2BQ8WXI9 593 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 C1GALT1C1Q96EU7 318 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 CMKLR1Q99788 373 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 NCOR1P1Q9H4R4 102 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 MEPEQ9NQ76 525 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 NPDC1Q9NQX5 325 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 RASL12Q9NYN1 266 aa16.41■□□□□ 0.22
POLR2J3-205ENST00000489144 TRAV27A0A087WT01 109 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 SCDO00767 359 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 ARPC5O15511 151 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 IL33O95760 270 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 IFI6P09912 130 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 ELK1P19419 428 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 AGAP20933 346 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 SRP9P49458 86 aaKnown RBP16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 CCR6P51684 374 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 FBXW4P57775 412 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 MBOAT2Q6ZWT7 520 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 SPICQ8N5J4 248 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 OR13C2Q8NGS9 318 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 TMEM239Q8WW34 195 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 MARS2Q96GW9 593 aaKnown RBP16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 TMEM27Q9HBJ8 222 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 TMEM9BQ9NQ34 198 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 COL27A1Q8IZC6 1860 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 VSTM2BA6NLU5 285 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 EEF1E1O43324 174 aaKnown RBP16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 SLC2A10O95528 541 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 NPBWR1P48145 328 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 TOMM34Q15785 309 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 SAPCD1Q5SSQ6 148 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 LIPNQ5VXI9 398 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 H3F3CQ6NXT2 135 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 PRDM13Q9H4Q3 707 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 SLC25A19Q9HC21 320 aa16.4■□□□□ 0.22
POLR2J3-205ENST00000489144 TLX2O43763 284 aaPredicted RBP16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 ENTPD6O75354 484 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 HIST1H2ABP04908 130 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 ZNF883P0CG24 379 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 SLC36A2Q495M3 483 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 CRTC2Q53ET0 693 aaPredicted RBP16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 RNLSQ5VYX0 342 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 MRPL14Q6P1L8 145 aaKnown RBP16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 PLBD1Q6P4A8 553 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 HIST3H2AQ7L7L0 130 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 CPEB2Q7Z5Q1 589 aaKnown RBP16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 NFAM1Q8NET5 270 aaPredicted RBP16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 OR51A7Q8NH64 312 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 HIST1H2ACQ93077 130 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms