RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 C12orf71A8MTZ7 269 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 C17orf100A8MU93 164 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 H3BSA7 217 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 PTP4A3O75365 173 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 GMNNO75496 209 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 NCR1O76036 304 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 NDUFB2O95178 105 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 CLPTM1O96005 669 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 IGHV3-13P01766 116 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 HSD17B1P14061 328 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 RPL4P36578 427 aaKnown RBP12.32□□□□□ -0.44
CLDN11-207ENST00000486975 WNT5AP41221 380 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 GDI2P50395 445 aaKnown RBP12.32□□□□□ -0.44
CLDN11-207ENST00000486975 TMEM33P57088 247 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 ERVK-25P63136 954 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 ENDOGQ14249 297 aaKnown RBP12.32□□□□□ -0.44
CLDN11-207ENST00000486975 MESTQ5EB52 335 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 GPR139Q6DWJ6 353 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 PGAM4Q8N0Y7 254 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 SPATA3Q8NHX4 192 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 SNX33Q8WV41 574 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 FAM46AQ96IP4 442 aaKnown RBP12.32□□□□□ -0.44
CLDN11-207ENST00000486975 FUZQ9BT04 418 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 SOX7Q9BT81 388 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 RACGAP1Q9H0H5 632 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 WNT5BQ9H1J7 359 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 NRIP3Q9NQ35 241 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 POLE4Q9NR33 117 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 ADA2Q9NZK5 511 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 GRHPRQ9UBQ7 328 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 ADAM18Q9Y3Q7 739 aa12.32□□□□□ -0.44
CLDN11-207ENST00000486975 PRSS37A4D1T9 235 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 C5orf49A4QMS7 147 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 XKRYO14609 159 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 RP2O75695 350 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 TGFAP01135 160 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 MT-ND5P03915 603 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 SEMG1P04279 462 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 COX5BP10606 129 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 NAT2P11245 290 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 ITGA2P17301 1181 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 TCN1P20061 433 aaPredicted RBP12.31□□□□□ -0.44
CLDN11-207ENST00000486975 HNF1AP20823 631 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 OMPP47874 163 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 CDH15P55291 814 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 SPATS1Q496A3 300 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 FGD3Q5JSP0 725 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 FAM120AOSQ5T036 256 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 TMEM154Q6P9G4 183 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 PIGWQ7Z7B1 504 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 ZNF101Q8IZC7 436 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 FAM86B1Q8N7N1 296 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 OR1J1Q8NGS3 322 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 AKR7LQ8NHP1 331 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 Q96M85 177 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 ZNF570Q96NI8 536 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 SNX18Q96RF0 628 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 ZNF416Q9BWM5 594 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 KRCC1Q9NPI7 259 aaPredicted RBP12.31□□□□□ -0.44
CLDN11-207ENST00000486975 EIF3KQ9UBQ5 218 aaKnown RBP12.31□□□□□ -0.44
CLDN11-207ENST00000486975 MXRA5Q9NR99 2828 aa12.31□□□□□ -0.44
CLDN11-207ENST00000486975 TEX13CA0A0J9YWL9 993 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 TRBV4-1A0A0J9YWV2 114 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 A0A1W2PPL8 197 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 COL8A2P25067 703 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 SDHAP31040 664 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 IL2RGP31785 369 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 GPR6P46095 362 aaPredicted RBP12.3□□□□□ -0.44
CLDN11-207ENST00000486975 SMIM11AP58511 58 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 TRIP10Q15642 601 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 ZNF718Q3SXZ3 478 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 SAMD4BQ5PRF9 694 aaKnown RBP12.3□□□□□ -0.44
CLDN11-207ENST00000486975 MBNL2Q5VZF2 373 aaKnown RBP12.3□□□□□ -0.44
CLDN11-207ENST00000486975 ADCK1Q86TW2 530 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 RNF148Q8N7C7 305 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 LINC01356Q8N9X3 169 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 YIPF5Q969M3 257 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 MARS2Q96GW9 593 aaKnown RBP12.3□□□□□ -0.44
CLDN11-207ENST00000486975 PYURFQ96I23 114 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 RSRC1Q96IZ7 334 aaKnown RBP12.3□□□□□ -0.44
CLDN11-207ENST00000486975 LRRC37BQ96QE4 947 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 ZNF275Q9NSD4 429 aaPredicted RBP12.3□□□□□ -0.44
CLDN11-207ENST00000486975 NDE1Q9NXR1 346 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 VSX1Q9NZR4 365 aaPredicted RBP12.3□□□□□ -0.44
CLDN11-207ENST00000486975 CGGBP1Q9UFW8 167 aaPredicted RBP12.3□□□□□ -0.44
CLDN11-207ENST00000486975 CD300AQ9UGN4 299 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 NDRG4Q9ULP0 352 aaKnown RBP12.3□□□□□ -0.44
CLDN11-207ENST00000486975 ARL2BPQ9Y2Y0 163 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 STAB1Q9NY15 2570 aa12.3□□□□□ -0.44
CLDN11-207ENST00000486975 H7C1C5 153 aa12.29□□□□□ -0.44
CLDN11-207ENST00000486975 DCTN3O75935 186 aa12.29□□□□□ -0.44
CLDN11-207ENST00000486975 TXNDC12O95881 172 aa12.29□□□□□ -0.44
CLDN11-207ENST00000486975 TFP02787 698 aa12.29□□□□□ -0.44
CLDN11-207ENST00000486975 ADH4P08319 380 aa12.29□□□□□ -0.44
CLDN11-207ENST00000486975 CTLA4P16410 223 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms