RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-204	ENST00000478061	NEUROG1	Q92886	237 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	OTULIN	Q96BN8	352 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	PLEKHA8	Q96JA3	519 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	RADIL	Q96JH8	1075 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	LURAP1	Q96LR2	239 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	OR2H1	Q9GZK4	316 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	WNT5B	Q9H1J7	359 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	HINT3	Q9NQE9	182 aa	Known RBP	11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	MRPL22	Q9NWU5	206 aa	Known RBP	11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	FBXL3	Q9UKT7	428 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	MOK	Q9UQ07	419 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	TIMM10B	Q9Y5J6	103 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	RTTN	Q86VV8	2226 aa		11.11	□□□□□ -0.63
RBM28-204	ENST00000478061	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	PRR23D1	E9PI22	279 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM28-204	ENST00000478061		E9PQ18	207 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	ATP6V1G2-DDX39B	F2Z307	99 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061		M0R129	80 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	PRKY	O43930	277 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	HLA-DQA2	P01906	255 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	CRYAA	P02489	173 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	CALCR	P30988	508 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	RAD23A	P54725	363 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	PCBD1	P61457	104 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	EFNB1	P98172	346 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	PSG4	Q00888	419 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	ZIK1	Q3SY52	487 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	ZNF672	Q499Z4	452 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	LINC01590	Q5TEZ4	76 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	LPCAT4	Q643R3	524 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	LYPD4	Q6UWN0	246 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	ZNF511	Q8NB15	262 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	CPEB3	Q8NE35	698 aa	Known RBP	11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	BBS1	Q8NFJ9	593 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	IL17RD	Q8NFM7	739 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	NRGN	Q92686	78 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	MBOAT4	Q96T53	435 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	WAC	Q9BTA9	647 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	PRRG3	Q9BZD7	231 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	TOR3A	Q9H497	397 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	DCLRE1B	Q9H816	532 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	POLR1D	Q9Y2S0	133 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	LHFPL6	Q9Y693	200 aa		11.1	□□□□□ -0.63
RBM28-204	ENST00000478061	PLCE1	Q9P212	2302 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	TVP23A	A6NH52	213 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	HS3ST1	O14792	307 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	CASQ2	O14958	399 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	ZNF35	P13682	527 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	APEX1	P27695	318 aa	Known RBP	11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	PEX2	P28328	305 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	FMO3	P31513	532 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	GGT2	P36268	569 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	CDH11	P55287	796 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	HIST1H3A	P68431	136 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	HGFAC	Q04756	655 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	PLP2	Q04941	152 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	SCRN3	Q0VDG4	424 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	AQP6	Q13520	282 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	LRRC36	Q1X8D7	754 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	HIST2H3PS2	Q5TEC6	136 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	ZNF774	Q6NX45	483 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	B3GLCT	Q6Y288	498 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	HIST2H3A	Q71DI3	136 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	CXXC5	Q7LFL8	322 aa	Known RBP	11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	DEPDC4	Q8N2C3	294 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	GALNT4	Q8N4A0	578 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	SLC30A7	Q8NEW0	376 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	KCNS3	Q9BQ31	491 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	GRIP2	Q9C0E4	1043 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	OR51V1	Q9H2C8	321 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	LIME1	Q9H400	295 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	UBTD1	Q9HAC8	227 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	ASH2L	Q9UBL3	628 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	HEATR1	Q9H583	2144 aa	Known RBP	11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	POLQ	O75417	2590 aa		11.09	□□□□□ -0.63
RBM28-204	ENST00000478061	TACC2	O95359	2948 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	IQCM	A0A1B0GVH7	501 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061		E7EQL1	145 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	DLGAP1	O14490	977 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	RER1	O15258	196 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	PRODH	O43272	600 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	SGCE	O43556	437 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	TLX2	O43763	284 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	GLCE	O94923	617 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	SNAP29	O95721	258 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	PTH	P01270	115 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	PSKH1	P11801	424 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	CCL2	P13500	99 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	SLC2A5	P22732	501 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	BLVRA	P53004	296 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	CORO6	Q6QEF8	472 aa		11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	VASH1	Q7L8A9	365 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM28-204	ENST00000478061	TCEANC	Q8N8B7	351 aa		11.08	□□□□□ -0.64

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