RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 RAB1BQ9H0U4 201 aa12.9□□□□□ -0.34
ATG4B-213ENST00000460211 SYT4Q9H2B2 425 aa12.9□□□□□ -0.34
ATG4B-213ENST00000460211 POLE4Q9NR33 117 aa12.9□□□□□ -0.34
ATG4B-213ENST00000460211 EIF3KQ9UBQ5 218 aaKnown RBP12.9□□□□□ -0.34
ATG4B-213ENST00000460211 U3KQV3 271 aa12.9□□□□□ -0.34
ATG4B-213ENST00000460211 GSC2O15499 205 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 SNAP29O95721 258 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 F12P00748 615 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-213ENST00000460211 GASTP01350 101 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 CSF3P09919 207 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 CTLA4P16410 223 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 GSTM3P21266 225 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 STOMP27105 288 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 CENPAP49450 140 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 PPOXP50336 477 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 GDI2P50395 445 aaKnown RBP12.89□□□□□ -0.35
ATG4B-213ENST00000460211 SCRN3Q0VDG4 424 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 TNK1Q13470 666 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 GLB1L2Q8IW92 636 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 SVOPLQ8N434 492 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 AQP11Q8NBQ7 271 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 CANT1Q8WVQ1 401 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
ATG4B-213ENST00000460211 SNX18Q96RF0 628 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 BCL2L14Q9BZR8 327 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 DYNLRB1Q9NP97 96 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 GPR160Q9UJ42 338 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 POMPQ9Y244 141 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 CDH10Q9Y6N8 788 aa12.89□□□□□ -0.35
ATG4B-213ENST00000460211 CCNOP22674 350 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 APEX1P27695 318 aaKnown RBP12.88□□□□□ -0.35
ATG4B-213ENST00000460211 CDKN2AP42771 156 aaKnown RBP12.88□□□□□ -0.35
ATG4B-213ENST00000460211 LSM6P62312 80 aaKnown RBP12.88□□□□□ -0.35
ATG4B-213ENST00000460211 PSG4Q00888 419 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 RGS7BPQ6MZT1 257 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-213ENST00000460211 LEG1Q6P5S2 330 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 ARL9Q6T311 187 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 CPEB3Q8NE35 698 aaKnown RBP12.88□□□□□ -0.35
ATG4B-213ENST00000460211 C11orf40Q8WZ69 217 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 DOK1Q99704 481 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 ZNF416Q9BWM5 594 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 OR2H1Q9GZK4 316 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 NUAK2Q9H093 628 aa12.88□□□□□ -0.35
ATG4B-213ENST00000460211 MMADHCQ9H3L0 296 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-213ENST00000460211 NDRG4Q9ULP0 352 aaKnown RBP12.88□□□□□ -0.35
ATG4B-213ENST00000460211 COA3Q9Y2R0 106 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-213ENST00000460211 ATRQ13535 2644 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 SYNGR3O43761 229 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 GPRIN2O60269 458 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 E2F6O75461 281 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 LCKP06239 509 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 FAM157BP0CG42 384 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 CCL2P13500 99 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 HIST1H1CP16403 213 aaKnown RBP12.87□□□□□ -0.35
ATG4B-213ENST00000460211 ARHGDIAP52565 204 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 UCP2P55851 309 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 COX10Q12887 443 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 PPP1R8Q12972 351 aaKnown RBP12.87□□□□□ -0.35
ATG4B-213ENST00000460211 ENDOGQ14249 297 aaKnown RBP12.87□□□□□ -0.35
ATG4B-213ENST00000460211 MOGQ16653 247 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 CLEC12AQ5QGZ9 265 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 ZNF770Q6IQ21 691 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-213ENST00000460211 PTCHD4Q6ZW05 846 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 C1orf174Q8IYL3 243 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 OR10G2Q8NGC3 310 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 OR52E2Q8NGJ4 325 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 OR4K13Q8NH42 304 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 AKR7LQ8NHP1 331 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 GIPC3Q8TF64 312 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 NEU4Q8WWR8 484 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-213ENST00000460211 NMNAT3Q96T66 252 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 DGCR6LQ9BY27 220 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 CADM1Q9BY67 442 aaKnown RBP12.87□□□□□ -0.35
ATG4B-213ENST00000460211 MS4A5Q9H3V2 200 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 EGLN3Q9H6Z9 239 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 SRA1Q9HD15 236 aaKnown RBP12.87□□□□□ -0.35
ATG4B-213ENST00000460211 MYOZ1Q9NP98 299 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-213ENST00000460211 EMC7Q9NPA0 242 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 TBC1D23Q9NUY8 699 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 IL20Q9NYY1 176 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 DUSP13Q9UII6 198 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 BAIAP2Q9UQB8 552 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 POLR1DQ9Y2S0 133 aa12.87□□□□□ -0.35
ATG4B-213ENST00000460211 A0A1W2PPW3 197 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 C5orf49A4QMS7 147 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 M0R233 179 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 COX5BP10606 129 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 GLO1Q04760 184 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 AQP6Q13520 282 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 SLC35F1Q5T1Q4 408 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 UGT2A3Q6UWM9 527 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 ICA1LQ8NDH6 482 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 FAM168AQ92567 244 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 POM121L2Q96KW2 1035 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 FOXN4Q96NZ1 517 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 SORCS2Q96PQ0 1159 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 SYT3Q9BQG1 590 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 TSSK6Q9BXA6 273 aa12.86□□□□□ -0.35
ATG4B-213ENST00000460211 REG4Q9BYZ8 158 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms