RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ST7LQ8TDW4 575 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 ATOH1Q92858 354 aaPredicted RBP11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 SLC25A36Q96CQ1 311 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 DPYSL5Q9BPU6 564 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 DPCDQ9BVM2 203 aaPredicted RBP11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 ULBP3Q9BZM4 244 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 SLC22A11Q9NSA0 550 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 GLTPQ9NZD2 209 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 FBLN5Q9UBX5 448 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 KIF25Q9UIL4 384 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 MKL2Q9ULH7 1088 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 SLC22A13Q9Y226 551 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 B3GALT1Q9Y5Z6 326 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 UBE2QL1A1L167 161 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 CDC14CA4D256 554 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 TSC22D2O75157 780 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 HLA-DQA2P01906 255 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 LPLP06858 475 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 SPARCP09486 303 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 UBCP0CG48 685 aaKnown RBP11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 PTHLHP12272 177 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 PNLIPP16233 465 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 ANXA7P20073 488 aaKnown RBP11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 HTR2CP28335 458 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 CSNK1EP49674 416 aaKnown RBP11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 MMP16P51512 607 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 STARD6P59095 220 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 TAS2R19P59542 299 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 TSPAN5P62079 268 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 OPCMLQ14982 345 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 WDR45BQ5MNZ6 344 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 PHF19Q5T6S3 580 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 B3GNTL1Q67FW5 361 aaPredicted RBP11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 SLC35D2Q76EJ3 337 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 NDUFAF7Q7L592 441 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 KANSL1Q7Z3B3 1105 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 BPHLQ86WA6 291 aaPredicted RBP11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 APCDD1LQ8NCL9 501 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 DUSP19Q8WTR2 217 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 RNF133Q8WVZ7 376 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 CITED4Q96RK1 184 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 SLC25A21Q9BQT8 299 aaPredicted RBP11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 NUDT16L1Q9BRJ7 211 aaKnown RBP11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 GSX2Q9BZM3 304 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 BEX1Q9HBH7 125 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 APMAPQ9HDC9 416 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 CA10Q9NS85 328 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 FGF21Q9NSA1 209 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 UPB1Q9UBR1 384 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 ING1Q9UK53 422 aaPredicted RBP11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 COA3Q9Y2R0 106 aaPredicted RBP11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 RP1P56715 2156 aa11.22□□□□□ -0.61
ECHDC1-209ENST00000454591 TRAV18A0A075B6X5 111 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 C17orf51A8MQB3 221 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 MCRIP1C9JLW8 97 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 M0R233 179 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 RRASP10301 218 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 NFYAP23511 347 aaPredicted RBP11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 SRSF4Q08170 494 aaKnown RBP11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 ZNF239Q16600 458 aaKnown RBP11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 NHLRC3Q5JS37 347 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 STEAP1BQ6NZ63 245 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 RHOUQ7L0Q8 258 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 ANKRD37Q7Z713 158 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 ADGRE4PQ86SQ3 457 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 NAXDQ8IW45 347 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 OR8H3Q8N146 312 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 OR2AK2Q8NG84 335 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 CCDC107Q8WV48 283 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 SEH1LQ96EE3 360 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 EDEM2Q9BV94 578 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 CHST11Q9NPF2 352 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 ZNF69Q9UC07 566 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 OPN4Q9UHM6 478 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 B3GALT5Q9Y2C3 310 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 LAMA3Q16787 3333 aa11.21□□□□□ -0.61
ECHDC1-209ENST00000454591 BRWD1Q9NSI6 2320 aa11.21□□□□□ -0.62
ECHDC1-209ENST00000454591 H3BUI4 141 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 B3GALNT1O75752 331 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 KDM4BO94953 1096 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 PMS2P2O95744 297 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 CRYZL1O95825 349 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 PLGP00747 810 aaPredicted RBP11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 FOSL2P15408 326 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 ZNF823P16415 610 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 CXCL2P19875 107 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 HSD11B1P28845 292 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 PPM1FP49593 454 aaPredicted RBP11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 GSK3AP49840 483 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 ZMYND11Q15326 602 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 ETFDHQ16134 617 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 TOR2AQ5JU69 321 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 PRAMEF17Q5VTA0 474 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 OR7E24Q6IFN5 339 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 RAB12Q6IQ22 244 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 FAAP20Q6NZ36 180 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 ZNF529Q6P280 563 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 LANCL3Q6ZV70 420 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 GABRG1Q8N1C3 465 aa11.2□□□□□ -0.62
ECHDC1-209ENST00000454591 SLC25A45Q8N413 288 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms