RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 PPIHO43447 177 aaKnown RBP17.68■□□□□ 0.42
SDC1-205ENST00000447124 SNX3O60493 162 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 DIRAS1O95057 198 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 H1F0P07305 194 aaKnown RBP17.68■□□□□ 0.42
SDC1-205ENST00000447124 RPL4P36578 427 aaKnown RBP17.68■□□□□ 0.42
SDC1-205ENST00000447124 OMPP47874 163 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 LIMS1P48059 325 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 LMO4P61968 165 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 DGCR6Q14129 220 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 SEC23BQ15437 767 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 KRTAP24-1Q3LI83 254 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 MESTQ5EB52 335 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 RRM2BQ7LG56 351 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 CYP4Z1Q86W10 505 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 FAM46AQ96IP4 442 aaKnown RBP17.68■□□□□ 0.42
SDC1-205ENST00000447124 GPA33Q99795 319 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 OR2J1Q9GZK6 312 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 FAM107BQ9H098 131 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 EMC7Q9NPA0 242 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 EIF3KQ9UBQ5 218 aaKnown RBP17.68■□□□□ 0.42
SDC1-205ENST00000447124 GRHPRQ9UBQ7 328 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 RPS6KA6Q9UK32 745 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 SIGLEC7Q9Y286 467 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 RHCEP18577 417 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 MSR1P21757 451 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 CRYBB2P43320 205 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 MMP15P51511 669 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 DVL1P1P54792 670 aaPredicted RBP17.67■□□□□ 0.42
SDC1-205ENST00000447124 FXYD6P3P58550 94 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 TSTQ16762 297 aaKnown RBP17.67■□□□□ 0.42
SDC1-205ENST00000447124 ZNF718Q3SXZ3 478 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 OTPQ5XKR4 325 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 THSD4Q6ZMP0 1018 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 RFPL4BQ6ZWI9 263 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 ALDH16A1Q8IZ83 802 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 KLF14Q8TD94 323 aaPredicted RBP17.67■□□□□ 0.42
SDC1-205ENST00000447124 SNX33Q8WV41 574 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 FUZQ9BT04 418 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 ADA2Q9NZK5 511 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 CACNG2Q9Y698 323 aa17.67■□□□□ 0.42
SDC1-205ENST00000447124 TRBV4-1A0A0J9YWV2 114 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 PRSS37A4D1T9 235 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 ICMTO60725 284 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 CTLA4P16410 223 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 GUCA1AP43080 201 aaPredicted RBP17.66■□□□□ 0.42
SDC1-205ENST00000447124 PCBD1P61457 104 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 MOGQ16653 247 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 PCGF3Q3KNV8 242 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 MBNL2Q5VZF2 373 aaKnown RBP17.66■□□□□ 0.42
SDC1-205ENST00000447124 SYT9Q86SS6 491 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 IPCEF1Q8WWN9 437 aaPredicted RBP17.66■□□□□ 0.42
SDC1-205ENST00000447124 RASD2Q96D21 266 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 DHRS1Q96LJ7 313 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 C4orf45Q96LM5 186 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 SPAG4Q9NPE6 437 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 NRIP3Q9NQ35 241 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 IL20RAQ9UHF4 553 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 KLHL21Q9UJP4 597 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 TMEM5Q9Y2B1 443 aa17.66■□□□□ 0.42
SDC1-205ENST00000447124 FAM32AQ9Y421 112 aaKnown RBP17.66■□□□□ 0.42
SDC1-205ENST00000447124 TEX13CA0A0J9YWL9 993 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 C12orf71A8MTZ7 269 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 B4DSR2 109 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 AHCYL1O43865 530 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 MPZL1O95297 269 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 IGHV1-46P01743 117 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 HNF1AP20823 631 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 GCH1P30793 250 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 ZNF81P51508 661 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 PPP1CBP62140 327 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 AVPI1Q5T686 147 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 USP51Q70EK9 711 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 OR52J3Q8NH60 311 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 ABHD4Q8TB40 342 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 ZNF570Q96NI8 536 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 GORASP2Q9H8Y8 452 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 IER3IP1Q9Y5U9 82 aa17.65■□□□□ 0.42
SDC1-205ENST00000447124 IGHV1-69-2A0A0G2JMI3 117 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 ZSCAN5BA6NJL1 495 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 SPRY3O43610 288 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 NDUFB2O95178 105 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 GAAP10253 952 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 MSX2P35548 267 aaPredicted RBP17.64■□□□□ 0.41
SDC1-205ENST00000447124 MVKQ03426 396 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 SPRNQ5BIV9 151 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 FGD3Q5JSP0 725 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 PTCHD4Q6ZW05 846 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 GPX7Q96SL4 187 aaPredicted RBP17.64■□□□□ 0.41
SDC1-205ENST00000447124 POFUT1Q9H488 388 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 LPAR2Q9HBW0 351 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 DECR2Q9NUI1 292 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 CD300AQ9UGN4 299 aa17.64■□□□□ 0.41
SDC1-205ENST00000447124 COA3Q9Y2R0 106 aaPredicted RBP17.64■□□□□ 0.41
SDC1-205ENST00000447124 XKRYO14609 159 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 SLC16A7O60669 478 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 TFP02787 698 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 SEMG1P04279 462 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 CDKN2AP42771 156 aaKnown RBP17.63■□□□□ 0.41
SDC1-205ENST00000447124 GYS2P54840 703 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 KRR1Q13601 381 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms