RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611	IFNA8	P32881	189 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ARHGDIA	P52565	204 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	CTXN1	P60606	82 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	RPL27	P61353	136 aa	Known RBP	12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ST3GAL3	Q11203	375 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	LRRC23	Q53EV4	343 aa	Predicted RBP	12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ZMAT1	Q5H9K5	638 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ZNF774	Q6NX45	483 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ARL9	Q6T311	187 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	IGFN1	Q86VF2	1251 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	SGMS2	Q8NHU3	365 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	C10orf82	Q8WW14	230 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	GEMIN6	Q8WXD5	167 aa	Known RBP	12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	BPIFA2	Q96DR5	249 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	C4orf45	Q96LM5	186 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ZNF583	Q96ND8	569 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ELOVL3	Q9HB03	270 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611	OPN4	Q9UHM6	478 aa		12.82	□□□□□ -0.36
CSNK1E-208	ENST00000431611		A0A1W2PPL8	197 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	C12orf71	A8MTZ7	269 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	MRAS	O14807	208 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	TIMM8A	O60220	97 aa	Predicted RBP	12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	FOXH1	O75593	365 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	PRSS23	O95084	383 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	IGHM	P01871	453 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	CD55	P08174	381 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	KDELR2	P33947	212 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	TNFAIP6	P98066	277 aa	Predicted RBP	12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	SPRN	Q5BIV9	151 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	MTX3	Q5HYI7	312 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	COQ5	Q5HYK3	327 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	FAM205BP	Q63HN1	556 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	FOXL2NB	Q6ZUU3	175 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ZDHHC22	Q8N966	263 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	OR51A7	Q8NH64	312 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	C22orf15	Q8WYQ4	148 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	TPD52L3	Q96J77	140 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	PRRC1	Q96M27	445 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	TMEM120A	Q9BXJ8	343 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	MSL2	Q9HCI7	577 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ESM1	Q9NQ30	184 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	NDRG4	Q9ULP0	352 aa	Known RBP	12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	A4GNT	Q9UNA3	340 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611	NPTN	Q9Y639	398 aa		12.81	□□□□□ -0.36
CSNK1E-208	ENST00000431611		A6NIZ1	184 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	FSHB	P01225	129 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	SBK2	P0C263	348 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	EGR1	P18146	543 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	MSR1	P21757	451 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	RAP1B	P61224	184 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	RAP1A	P62834	184 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	PSG7	Q13046	419 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ENDOG	Q14249	297 aa	Known RBP	12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ZER1	Q7Z7L7	766 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	SYT9	Q86SS6	491 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	MICU2	Q8IYU8	434 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	LRRC75A	Q8NAA5	344 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	DCLRE1C	Q96SD1	692 aa	Known RBP	12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	NTN4	Q9HB63	628 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	DDX28	Q9NUL7	540 aa	Known RBP	12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	MRGBP	Q9NV56	204 aa		12.8	□□□□□ -0.36
CSNK1E-208	ENST00000431611	PPIAL4E	A0A075B759	164 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	TRAV27	A0A087WT01	109 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	PPIAL4C	A0A0B4J2A2	164 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	BBIP1	A8MTZ0	92 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	FAM220BP	B1ANY3	271 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	PPIAL4D	F5H284	164 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ABHD16A	O95870	558 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	PPIAL4F	P0DN26	164 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	GSTM3	P21266	225 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ZFP36	P26651	326 aa	Known RBP	12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	YAP1	P46937	504 aa	Known RBP	12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	UBA52	P62987	128 aa	Known RBP	12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	SELENOW	P63302	87 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	KLF10	Q13118	480 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	CDK5R2	Q13319	367 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	MAPRE2	Q15555	327 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	ANKDD1A	Q495B1	522 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	AWAT1	Q58HT5	328 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	RBMS3	Q6XE24	437 aa	Known RBP	12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	OAF	Q86UD1	273 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	NRM	Q8IXM6	262 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	NPEPL1	Q8NDH3	523 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	OR2T12	Q8NG77	320 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	WAC	Q9BTA9	647 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	POLE4	Q9NR33	117 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	TMEM106B	Q9NUM4	274 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	GID8	Q9NWU2	228 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	DCAF16	Q9NXF7	216 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	RHCG	Q9UBD6	479 aa		12.79	□□□□□ -0.36
CSNK1E-208	ENST00000431611	LOC100653049	A0A140TA62	436 aa		12.78	□□□□□ -0.36
CSNK1E-208	ENST00000431611	EFCAB9	A8MZ26	197 aa		12.78	□□□□□ -0.36
CSNK1E-208	ENST00000431611	KRT34	O76011	436 aa		12.78	□□□□□ -0.36
CSNK1E-208	ENST00000431611	IGHV2-70	P01814	119 aa		12.78	□□□□□ -0.36
CSNK1E-208	ENST00000431611	SCG5	P05408	212 aa		12.78	□□□□□ -0.36
CSNK1E-208	ENST00000431611	COX5B	P10606	129 aa		12.78	□□□□□ -0.36
CSNK1E-208	ENST00000431611	FUT4	P22083	530 aa		12.78	□□□□□ -0.36
CSNK1E-208	ENST00000431611	TUBG1	P23258	451 aa		12.78	□□□□□ -0.36
CSNK1E-208	ENST00000431611	TNFSF4	P23510	183 aa		12.78	□□□□□ -0.36
CSNK1E-208	ENST00000431611	PRKCD	Q05655	676 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms