RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TSPAN2O60636 221 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SH3BGRLO75368 114 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SAP30O75446 220 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 STX11O75558 287 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 GPX5O75715 221 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 EIF3GO75821 320 aaKnown RBP eCLIP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 OR4F21O95013 312 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SERPIND1P05546 499 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 KLK3P07288 261 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 BPGMP07738 259 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 HTR1AP08908 422 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 RFPL3SP0C7P2 107 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PNMTP11086 282 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SLC2A1P11166 492 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PRPS2P11908 318 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MUC1P15941 1255 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SRD5A1P18405 259 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 IL1RNP18510 177 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 TSPAN8P19075 237 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 TCN2P20062 427 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 HNF1AP20823 631 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PTNP21246 168 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MPZP25189 248 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PAX6P26367 422 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 ELAVL4P26378 380 aaKnown RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 HTR2AP28223 471 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CRABP1P29762 137 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PRDX2P32119 198 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 OR1D4P47884 311 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CCR8P51685 355 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 NR0B1P51843 470 aaKnown RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 AKR1D1P51857 326 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 TMPRSS3P57727 454 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CD81P60033 236 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 RPS7P62081 194 aaKnown RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 REEP5Q00765 189 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 HNF4GQ14541 408 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 NEDD8Q15843 81 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 NRF1Q16656 503 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PCK2Q16822 640 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 FAM83EQ2M2I3 478 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 EXOC3L2Q2M3D2 409 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CTU2Q2VPK5 515 aaKnown RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PRTGQ2VWP7 1150 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CDNFQ49AH0 187 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MLIPQ5VWP3 458 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 TTC23Q5W5X9 447 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PRR27Q6MZM9 219 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 RHBDD2Q6NTF9 364 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 BTNL8Q6UX41 500 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 HACD2Q6Y1H2 254 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SIGLEC15Q6ZMC9 328 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PQLC2Q6ZP29 291 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 TMPRSS11FQ6ZWK6 438 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 COX15Q7KZN9 410 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SSX9Q7RTT3 188 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SLC16A9Q7RTY1 509 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PAGE2Q7Z2X7 111 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MAVSQ7Z434 540 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MEX3DQ86XN8 651 aaKnown RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PRSS58Q8IYP2 241 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 C8orf59Q8N0T1 100 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 GPR137CQ8N3F9 429 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 RNF175Q8N4F7 328 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 DHRSXQ8N5I4 330 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PARP16Q8N5Y8 322 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 NANOGP1Q8N7R0 232 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 BHLHE22Q8NFJ8 381 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MCFD2Q8NI22 146 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 RNASE11Q8TAA1 199 aaKnown RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 NANPQ8TBE9 248 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 STAG3L4Q8TBR4 150 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MITD1Q8WV92 249 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 FAR1Q8WVX9 515 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 HGDQ93099 445 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CCDC124Q96CT7 223 aaKnown RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CENPNQ96H22 339 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 LURAP1Q96LR2 239 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 LINC00052Q96N35 136 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 OR2A5Q96R48 311 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 RAB40CQ96S21 281 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 EBF4Q9BQW3 602 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 ALKBH7Q9BT30 221 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 TMEM43Q9BTV4 400 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 TRMOQ9BU70 441 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CHRNA10Q9GZZ6 450 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 RHBGQ9H310 441 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 ACTL8Q9H568 366 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PRORYQ9H606 182 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 AUNIPQ9H7T9 357 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CALHM2Q9HA72 323 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MEAF6Q9HAF1 191 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 NMRAL1Q9HBL8 299 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MMP25Q9NPA2 562 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 AGPAT4Q9NRZ5 378 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CUTCQ9NTM9 273 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 NUDT4Q9NZJ9 180 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PDP1Q9P0J1 537 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 COPZ2Q9P299 210 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 MYEF2Q9P2K5 600 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms