RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 BDKRB2P30411 391 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 CAPZA2P47755 286 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 EIF1AXP47813 144 aaKnown RBP12.4□□□□□ -0.42
COL6A2-203ENST00000397763 SKP1P63208 163 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 PABPC1L2AQ5JQF8 200 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 LDLRAD3Q86YD5 345 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 CLEC1AQ8NC01 280 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 OR6K3Q8NGY3 331 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 C4orf45Q96LM5 186 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 CRB3Q9BUF7 120 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 NPIPB9F8W1W9 429 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 OR6A2O95222 327 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 VAMP1P23763 118 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 NTSR1P30989 418 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 CAPZA1P52907 286 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 ATP1B3P54709 279 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 ZNF141Q15928 474 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 LINC00346Q8IVM7 164 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 EXD3Q8N9H8 876 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 ZNF417Q8TAU3 575 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 THAP6Q8TBB0 222 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 SEH1LQ96EE3 360 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 NXF5Q9H1B4 397 aaKnown RBP12.4□□□□□ -0.42
COL6A2-203ENST00000397763 TREM1Q9NP99 234 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 COMMD9Q9P000 198 aa12.4□□□□□ -0.42
COL6A2-203ENST00000397763 ZMAT5Q9UDW3 170 aaKnown RBP12.4□□□□□ -0.42
COL6A2-203ENST00000397763 A0A0J9YY10 115 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 OR5H14A6NHG9 310 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 OR2AT4A6NND4 320 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 FARS2O95363 451 aaKnown RBP12.4□□□□□ -0.43
COL6A2-203ENST00000397763 HLA-AP01891 365 aaKnown RBP12.4□□□□□ -0.43
COL6A2-203ENST00000397763 ZNF806P0C7X5 589 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 DLSTP36957 453 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 CORO6Q6QEF8 472 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 CHST4Q8NCG5 386 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 NANPQ8TBE9 248 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 SPACA5Q96QH8 159 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 SLC6A7Q99884 636 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 LMF2Q9BU23 707 aaKnown RBP12.4□□□□□ -0.43
COL6A2-203ENST00000397763 MFRPQ9BY79 579 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 OR11A1Q9GZK7 315 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 MSRAQ9UJ68 235 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 ETV7Q9Y603 341 aa12.4□□□□□ -0.43
COL6A2-203ENST00000397763 DENND4AQ7Z401 1863 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 C13orf42A0A1B0GVH6 325 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 ZNF705EA8MWA4 302 aaPredicted RBP12.39□□□□□ -0.43
COL6A2-203ENST00000397763 CSRP1P21291 193 aaKnown RBP12.39□□□□□ -0.43
COL6A2-203ENST00000397763 RAB13P51153 203 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 DHRS2Q13268 280 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 BIKQ13323 160 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 SWI5Q1ZZU3 235 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 TMEM71Q6P5X7 295 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 BPIFB2Q8N4F0 458 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 DEFB119Q8N690 84 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 EID2Q8N6I1 236 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 GPR119Q8TDV5 335 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 PHYHIPQ92561 330 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 CMTM3Q96MX0 182 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 SLC25A32Q9H2D1 315 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 RASL12Q9NYN1 266 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 CELSR3Q9NYQ7 3312 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 ZNF254O75437 659 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 SPP1P10451 314 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 MRPS10P82664 201 aaKnown RBP12.39□□□□□ -0.43
COL6A2-203ENST00000397763 ATPAF1Q5TC12 328 aaPredicted RBP12.39□□□□□ -0.43
COL6A2-203ENST00000397763 SLC16A13Q7RTY0 426 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 ATG4DQ86TL0 474 aaPredicted RBP12.39□□□□□ -0.43
COL6A2-203ENST00000397763 OOSP2Q86WS3 158 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 LRRC75AQ8NAA5 344 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 ELSPBP1Q96BH3 223 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 MAP3K3Q99759 626 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 HIF3AQ9Y2N7 669 aa12.39□□□□□ -0.43
COL6A2-203ENST00000397763 TRAV20A0A0B4J274 112 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 OR14I1A6ND48 311 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 EFCAB7A8K855 629 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 C17orf105B2RV13 164 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 PRSS44E7EML9 344 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 CDC40O60508 579 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL6A2-203ENST00000397763 AQP8O94778 261 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 RENP00797 406 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 DCNP07585 359 aaKnown RBP12.38□□□□□ -0.43
COL6A2-203ENST00000397763 UBBP0CG47 229 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 UBCP0CG48 685 aaKnown RBP12.38□□□□□ -0.43
COL6A2-203ENST00000397763 AKR1C4P17516 323 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 GPR3P46089 330 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 OR1D4P47884 311 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 PSMD4P55036 377 aaKnown RBP12.38□□□□□ -0.43
COL6A2-203ENST00000397763 RPS27AP62979 156 aaKnown RBP12.38□□□□□ -0.43
COL6A2-203ENST00000397763 UBA52P62987 128 aaKnown RBP12.38□□□□□ -0.43
COL6A2-203ENST00000397763 ADAM8P78325 824 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 SRSF3P84103 164 aaKnown RBP12.38□□□□□ -0.43
COL6A2-203ENST00000397763 SCRN3Q0VDG4 424 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 EIF2B1Q14232 305 aaKnown RBP12.38□□□□□ -0.43
COL6A2-203ENST00000397763 CDNFQ49AH0 187 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 ARMC6Q6NXE6 501 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 RAB11FIP2Q7L804 512 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 NUDCD2Q8WVJ2 157 aa12.38□□□□□ -0.43
COL6A2-203ENST00000397763 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.38□□□□□ -0.43
COL6A2-203ENST00000397763 FBXO17Q96EF6 278 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 1533.9 ms