RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 PRAMEF5Q5TYX0 476 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 PRAMEF6Q5VXH4 476 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 APOBEC4Q8WW27 367 aaKnown RBP13.57□□□□□ -0.24
LRRK1-201ENST00000388948 ZNF346Q9UL40 294 aaKnown RBP13.57□□□□□ -0.24
LRRK1-201ENST00000388948 OR5H15A6NDH6 313 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 OR5H14A6NHG9 310 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 OR5H1A6NKK0 313 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 SNRPBP14678 240 aaKnown RBP13.57□□□□□ -0.24
LRRK1-201ENST00000388948 PIGAP37287 484 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 FAM109BQ6ICB4 259 aaPredicted RBP13.57□□□□□ -0.24
LRRK1-201ENST00000388948 LSRQ86X29 649 aaPredicted RBP13.57□□□□□ -0.24
LRRK1-201ENST00000388948 ST8SIA4Q92187 359 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 SLC29A1Q99808 456 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 RNF32Q9H0A6 362 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 TRIP11Q15643 1979 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 ECM29Q5VYK3 1845 aa13.57□□□□□ -0.24
LRRK1-201ENST00000388948 I6L893 689 aaPredicted RBP13.56□□□□□ -0.24
LRRK1-201ENST00000388948 PMP2P02689 132 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 SRPXP78539 464 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 IDO2Q6ZQW0 420 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 MRPS24Q96EL2 167 aaKnown RBP13.56□□□□□ -0.24
LRRK1-201ENST00000388948 ATF6BQ99941 703 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 TNFRSF19Q9NS68 423 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 PKD1L3Q7Z443 1732 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 NOTOA8MTQ0 251 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 DSCR4P56555 118 aaPredicted RBP13.56□□□□□ -0.24
LRRK1-201ENST00000388948 GK2Q14410 553 aaPredicted RBP13.56□□□□□ -0.24
LRRK1-201ENST00000388948 Q6ZNB5 142 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 DPPA2Q7Z7J5 298 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 OR7G2Q8NG99 324 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 NANPQ8TBE9 248 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 OR52A5Q9H2C5 316 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.56□□□□□ -0.24
LRRK1-201ENST00000388948 F6UZH7 168 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 DVL1O14640 695 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 GMDSO60547 372 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 DVL1P1P54792 670 aaPredicted RBP13.56□□□□□ -0.24
LRRK1-201ENST00000388948 NFATC3Q12968 1075 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 FAM74A1Q5RGS3 127 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 SPATA46Q5T0L3 261 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 B3GNT8Q7Z7M8 397 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 HYLS1Q96M11 299 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 BCO1Q9HAY6 547 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 SPACA1Q9HBV2 294 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 RCE1Q9Y256 329 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 ATP6V1G1O75348 118 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 B4GALT1P15291 398 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 TGM1P22735 817 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 SLC35D3Q5M8T2 416 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 ZNF626Q68DY1 528 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 FAM109AQ8N4B1 249 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 SYT11Q9BT88 431 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 BANF2Q9H503 90 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 SLC17A4Q9Y2C5 497 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 K7EPK0 472 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 K7EQS6 105 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 GABRA5P31644 462 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 ZNF74Q16587 644 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 LRRC10Q5BKY1 277 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 WIPI1Q5MNZ9 446 aaPredicted RBP13.56□□□□□ -0.24
LRRK1-201ENST00000388948 Q6ZSR9 355 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 FAM71E2Q8N5Q1 922 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 CNTNAP3BQ96NU0 1288 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 TXN2Q99757 166 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 ANKRD60Q9BZ19 345 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 IL21Q9HBE4 155 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 SEMA4GQ9NTN9 838 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 PNLIPRP2P54317 469 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 SSPNQ14714 243 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 SUMF2Q8NBJ7 301 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 OR1J1Q8NGS3 322 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 OR51H1Q8NH63 302 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 TRMT61AQ96FX7 289 aaKnown RBP13.56□□□□□ -0.24
LRRK1-201ENST00000388948 REEP6Q96HR9 211 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 LYSMD1Q96S90 227 aa13.56□□□□□ -0.24
LRRK1-201ENST00000388948 TRPM6Q9BX84 2022 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 FPR3P25089 353 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 SYT14P1Q58G82 188 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 GABRG1Q8N1C3 465 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 MMP28Q9H239 520 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 OR2W5A6NFC9 320 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 CSF3P09919 207 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 HTR1FP30939 366 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-201ENST00000388948 UBE2G2P60604 165 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 SLAMF6Q96DU3 332 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 GLI3P10071 1580 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 IGHV1OR15-9A0A0B4J2B8 117 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 NUDT19A8MXV4 375 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 TNFRSF1AP19438 455 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 ACSM1Q08AH1 577 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.55□□□□□ -0.24
LRRK1-201ENST00000388948 TMEM174Q8WUU8 243 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 TMEM38AQ9H6F2 299 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 NHSQ6T4R5 1651 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 TMEM82A0PJX8 343 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 CLDN24A6NM45 220 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 E9PI62 339 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 FBXO24O75426 580 aa13.55□□□□□ -0.24
LRRK1-201ENST00000388948 BEX5Q5H9J7 111 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms