RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 B3GALT4O96024 378 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 IFNA17P01571 189 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SHC1P29353 583 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 POLR2IP36954 125 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SSBP1Q04837 148 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SIGLEC14Q08ET2 396 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 OR8B8Q15620 311 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 C9orf135Q5VTT2 229 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 STEAP1BQ6NZ63 245 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 VHLLQ6RSH7 139 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 LSRQ86X29 649 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 GIMAP1Q8WWP7 306 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SMIM19Q96E16 107 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 FGF20Q9NP95 211 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 NDUFB11Q9NX14 153 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 R4GMQ9 66 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 A0A087WUJ7 227 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 IGHV1OR21-1A0A087WYE8 117 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SULT1C2O00338 296 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 GDNFP39905 211 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 AGERQ15109 404 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 OR8G1Q15617 311 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ANGPTL5Q86XS5 388 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF511Q8NB15 262 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 TSLPQ969D9 159 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 GON7Q9BXV9 100 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ANKRD10Q9NXR5 420 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 BRCA1P38398 1863 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 MSTNO14793 375 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 MT-ND4P03905 459 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 EPHA1P21709 976 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 GALP22466 123 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 S100A12P80511 92 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ADPRMQ3LIE5 342 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 LIPNQ5VXI9 398 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 LYPD4Q6UWN0 246 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 GDPD3Q7L5L3 318 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 PTOV1Q86YD1 416 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 DTWD2Q8NBA8 298 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 DRAXINQ8NBI3 349 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 OR2V1Q8NHB1 315 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 NANPQ8TBE9 248 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 EMG1Q92979 244 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 DUSP15Q9H1R2 295 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 MMP28Q9H239 520 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 LUZP4Q9P127 313 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 COL4A1P02462 1669 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 OTOFQ9HC10 1997 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 G3V3Y1 287 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 NARSO43776 548 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CRYAAP02489 173 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 RFX2P48378 723 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 RPS18P62269 152 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PEA15Q15121 130 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 GPR157Q5UAW9 335 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PLXDC2Q6UX71 529 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CISD2Q8N5K1 135 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 BEST4Q8NFU0 473 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ELMOD3Q96FG2 381 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ATF6BQ99941 703 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SLC22A11Q9NSA0 550 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 GNG12Q9UBI6 72 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 COL4A5P29400 1685 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PATJQ8NI35 1801 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ANKRD33BA6NCL7 494 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 AGAP14A8MT82 685 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 FAM166BA8MTA8 275 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CEBPZOSA8MTT3 80 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 M0R135 149 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 HRO43593 1189 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 IFNA10P01566 189 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF728P0DKX0 622 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ABCD3P28288 659 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 THBS3P49746 956 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PCBP4P57723 403 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CTU2Q2VPK5 515 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 LAIR1Q6GTX8 287 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 RBM45Q8IUH3 476 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ASB13Q8WXK3 278 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF799Q96GE5 643 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CNTNAP3BQ96NU0 1288 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ARHGDIGQ99819 225 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF436Q9C0F3 470 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 RIMS4Q9H426 269 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 DUSP21Q9H596 190 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PLEKHF2Q9H8W4 249 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 EXOSC3Q9NQT5 275 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 UNC13CQ8NB66 2214 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 HBE1P02100 147 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SNRPBP14678 240 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PRICKLE4Q2TBC4 344 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PAN3Q58A45 887 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 AADACL3Q5VUY0 350 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 GPR155Q7Z3F1 870 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF546Q86UE3 836 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 MBOAT4Q96T53 435 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 FAM117AQ9C073 453 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 C12orf49Q9H741 205 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 DUSP13Q9UII6 198 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms