RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr424E9Q0Q2 315 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm37240E9QAY5 252 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 GzmmO08643 264 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 MstnO08689 376 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Best1O88870 551 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fabp7P51880 132 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rap1aP62835 184 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 SprQ64105 261 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Csnk1g2Q8BVP5 415 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Vmn1r200Q8R281 312 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1390Q8VGW9 311 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rap1bQ99JI6 184 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Smim3Q99PE5 60 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gfod2Q9CYH5 385 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ppa1Q9D819 289 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 FastkQ9JIX9 511 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Arpc3Q9JM76 178 aaKnown RBP14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fthl17bA2AHC5 176 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fthl17cA2AHC6 176 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Vmn2r45L7N2B5 852 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Hsd17b12O70503 312 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Zfp59P16373 634 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Sox18P43680 377 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Casp3P70677 277 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Esp1Q3LHH8 102 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fthl17dQ3SXD1 176 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fthl17fQ3SXD2 176 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Prss43Q76HL1 382 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fam124bQ8BLQ0 456 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Nyap2Q8BM65 682 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Smco3Q8BQM7 225 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fthl17Q99MX2 176 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc52a3Q9D6X5 460 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 MyotQ9JIF9 496 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 CroccQ8CJ40 2009 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr653E9PVA0 317 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rarres1F6ZIS7 283 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc2a1P17809 492 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Pou3f1P21952 449 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1299Q7TQX5 312 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr461Q8VF30 313 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ca13Q9D6N1 262 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 AicdaQ9WVE0 198 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm2075J3QMW5 144 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm8024L7N2E0 100 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Galr3O88853 370 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Sult2a1P52843 285 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Sirt6P59941 334 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fxyd2Q04646 70 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fbxw16Q497Z0 464 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Spock1Q62288 442 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Hapln3Q80WM5 359 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Pck2Q8BH04 640 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 2810021J22RikQ8BIB6 539 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ankrd46Q8BTZ5 228 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Hyal3Q8VEI3 412 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc35a4Q9D321 324 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Vmn1r40Q9EQ46 310 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Sp6Q9ESX2 376 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ccl27Q9Z1X0 120 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rasal1Q9Z268 799 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fbxw15L7N1X6 466 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm5458L7N219 204 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Cbr3Q8K354 277 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tmem234Q8R1E7 140 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr272Q8VGA0 319 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Kcnj16Q9Z307 419 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1205A2ATJ7 307 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Esp15A8R0U8 85 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1471F6QVZ8 314 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Socs1O35716 212 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Emp3O35912 163 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Zfp1P08042 402 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 H2-T3P14432 384 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Q3U6N9 222 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 CelQ64285 599 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 GmdsQ8K0C9 372 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Arpc5Q9CPW4 151 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Yif1bQ9CX30 311 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Aqp9Q9JJJ3 295 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm11214V9GX06 183 aa14.29□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm12790B1AUV6 201 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 9330182O14RikJ3QNB2 140 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 P06321 130 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rab19P35294 217 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Zfp36l3Q5ISE2 725 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr305Q7TS02 319 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr70Q80ZX9 316 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr510Q8VEW6 314 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Dimt1Q9D0D4 313 aaKnown RBP14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tcrg-C4A0A075B6C7 190 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm45711E0CXA2 391 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Macc1E9PXX8 851 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr557E9Q550 322 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 ApodP51910 189 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr151Q60893 309 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ska3Q8C263 411 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 HinfpQ8K1K9 503 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Lpcat3Q91V01 487 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Sfxn5Q925N0 342 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms