RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 MICAQ29983 383 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 KRT80Q6KB66 452 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 ZNF620Q6ZNG0 422 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 PTCHD4Q6ZW05 846 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 SPATA24Q86W54 205 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 SLC30A7Q8NEW0 376 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 SYT4Q9H2B2 425 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 C1orf198Q9H425 327 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 BARX1Q9HBU1 254 aaPredicted RBP14.45□□□□□ -0.1
SSBP4-213ENST00000602088 CCNB1IP1Q9NPC3 277 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 SLC7A8Q9UHI5 535 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 SAMHD1Q9Y3Z3 626 aaKnown RBP14.45□□□□□ -0.1
SSBP4-213ENST00000602088 SPEF1Q9Y4P9 236 aa14.45□□□□□ -0.1
SSBP4-213ENST00000602088 IQCMA0A1B0GVH7 501 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 TCRBV3S1A0A5B6 114 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 CST1P01037 141 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 SCG5P05408 212 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 ZNF32P17041 273 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 MSR1P21757 451 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 ENDOGQ14249 297 aaKnown RBP14.44□□□□□ -0.1
SSBP4-213ENST00000602088 GK3PQ14409 553 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 RAB35Q15286 201 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 PABPC1L2AQ5JQF8 200 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 CPEB3Q8NE35 698 aaKnown RBP14.44□□□□□ -0.1
SSBP4-213ENST00000602088 C18orf12Q96KH6 178 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 BDH2Q9BUT1 245 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 IFT27Q9BW83 186 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 PLK3Q9H4B4 646 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 EGLN3Q9H6Z9 239 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 POLE4Q9NR33 117 aa14.44□□□□□ -0.1
SSBP4-213ENST00000602088 TMEM129A0AVI4 362 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 TRIM64A6NGJ6 449 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 TRIM64BA6NI03 449 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 IDH3BO43837 385 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 SLC16A7O60669 478 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 KHDRBS3O75525 346 aaKnown RBP14.43□□□□□ -0.1
SSBP4-213ENST00000602088 SNAP29O95721 258 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 CCL2P13500 99 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 APEX1P27695 318 aaKnown RBP14.43□□□□□ -0.1
SSBP4-213ENST00000602088 GLRXP35754 106 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 PCBD1P61457 104 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 PSG4Q00888 419 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 GALK2Q01415 458 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 HSF2Q03933 536 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 CLEC12BQ2HXU8 276 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 TBC1D28Q2M2D7 210 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 RPL13AP3Q6NVV1 102 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 DNM1P46Q6ZS02 220 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 RASSF6Q6ZTQ3 369 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 PAQR4Q8N4S7 273 aaPredicted RBP14.43□□□□□ -0.1
SSBP4-213ENST00000602088 AQP11Q8NBQ7 271 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 OR1J2Q8NGS2 313 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 ZNF416Q9BWM5 594 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 DGCR6LQ9BY27 220 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 NUAK2Q9H093 628 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 IL20Q9NYY1 176 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 COA3Q9Y2R0 106 aaPredicted RBP14.43□□□□□ -0.1
SSBP4-213ENST00000602088 CMAHPQ9Y471 501 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 TIMM10BQ9Y5J6 103 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 CDH10Q9Y6N8 788 aa14.43□□□□□ -0.1
SSBP4-213ENST00000602088 NIPBLQ6KC79 2804 aaeCLIP14.42□□□□□ -0.17e-6■■□□□ 12.9
SSBP4-213ENST00000602088 SETD2Q9BYW2 2564 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-213ENST00000602088 GPRIN2O60269 458 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 HIST1H1CP16403 213 aaKnown RBP14.42□□□□□ -0.1
SSBP4-213ENST00000602088 APLNRP35414 380 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 SNRPD2P62316 118 aaKnown RBP14.42□□□□□ -0.1
SSBP4-213ENST00000602088 TNK1Q13470 666 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 MSMPQ1L6U9 139 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 LEG1Q6P5S2 330 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 UGT2A3Q6UWM9 527 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 SYT9Q86SS6 491 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 GLB1L2Q8IW92 636 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 CIARTQ8N365 385 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-213ENST00000602088 PAPD5Q8NDF8 572 aaKnown RBP14.42□□□□□ -0.1
SSBP4-213ENST00000602088 AKR7LQ8NHP1 331 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 FOXN4Q96NZ1 517 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 SNX18Q96RF0 628 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 DOK1Q99704 481 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 WACQ9BTA9 647 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 OR2H1Q9GZK4 316 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 WNT5BQ9H1J7 359 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 MMADHCQ9H3L0 296 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-213ENST00000602088 RERGLQ9H628 205 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 CDH20Q9HBT6 801 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 EMC7Q9NPA0 242 aa14.42□□□□□ -0.1
SSBP4-213ENST00000602088 FBXO9Q9UK97 447 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-213ENST00000602088 C12orf71A8MTZ7 269 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 H7C1Q1 480 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 DCTN6O00399 190 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 BHLHE40O14503 412 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 SSX4O60224 188 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 GSTM3P21266 225 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 STOMP27105 288 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 PCSK6P29122 969 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 NOS3P29474 1203 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 CRABP1P29762 137 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 NUDT6P53370 316 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 RPS23P62266 143 aaKnown RBP14.41□□□□□ -0.1
SSBP4-213ENST00000602088 CLEC12AQ5QGZ9 265 aa14.41□□□□□ -0.1
SSBP4-213ENST00000602088 CD300LDQ6UXZ3 194 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms