RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 EFNB1P98172 346 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 TUBA1AQ71U36 451 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 THAP5Q7Z6K1 395 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 FBXL14Q8N1E6 418 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 FAM81AQ8TBF8 368 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 FBLIM1Q8WUP2 373 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 ZNF837Q96EG3 531 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-225ENST00000569245 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 C18orf12Q96KH6 178 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 CNBD2Q96M20 576 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 SLC38A2Q96QD8 506 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 DHRS9Q9BPW9 319 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 INIPQ9NRY2 104 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 FLNAP21333 2647 aaKnown RBP12.62□□□□□ -0.39
COMMD4-225ENST00000569245 MED13LQ71F56 2210 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 DSCAMO60469 2012 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 NPIPB13A6NJU9 1138 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 NPIPB4C9JG80 1138 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 SMAD7O15105 426 aaKnown RBP12.61□□□□□ -0.39
COMMD4-225ENST00000569245 SURF4O15260 269 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 PPP1R3DO95685 299 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 TXNDC12O95881 172 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 IGHMP01871 453 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 HOXB1P14653 301 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-225ENST00000569245 GABRB1P18505 474 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 PAX7P23759 505 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 TTKP33981 857 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 CSNK1A1P48729 337 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 CTXN1P60606 82 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 MYBPC1Q00872 1141 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 TEKQ02763 1124 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 MAD2L1BPQ15013 274 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-225ENST00000569245 PHYHD1Q5SRE7 291 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 SLC35D2Q76EJ3 337 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 FAM122BQ7Z309 247 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 ENTHD1Q8IYW4 607 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 MUC15Q8N387 334 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 OR8J1Q8NGP2 316 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 RHOXF1Q8NHV9 184 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 LRR1Q96L50 414 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 TRAF4Q9BUZ4 470 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-225ENST00000569245 KATNB1Q9BVA0 655 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 ULBP2Q9BZM5 246 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 GSX1Q9H4S2 264 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-225ENST00000569245 MOV10Q9HCE1 1003 aaKnown RBP12.61□□□□□ -0.39
COMMD4-225ENST00000569245 DLL4Q9NR61 685 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 IMPAD1Q9NX62 359 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 TVP23BQ9NYZ1 205 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 UBAP1Q9NZ09 502 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 MOKQ9UQ07 419 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 ACANP16112 2415 aa12.61□□□□□ -0.39
COMMD4-225ENST00000569245 ZNF469Q96JG9 3925 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-225ENST00000569245 ARPC4-TTLL3A0A0A6YYG9 625 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 IGHV1-18A0A0C4DH31 117 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 TRIM64A6NGJ6 449 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 TRIM64BA6NI03 449 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 ZNF99A8MXY4 864 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-225ENST00000569245 ATP6V1G2-DDX39BF2Z307 99 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 H7C1Q1 480 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 OVOL3O00110 214 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 SEC14L2O76054 403 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 CD8AP01732 235 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 CRYAAP02489 173 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 F13BP05160 661 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 INHBBP09529 407 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 SNRPGP62308 76 aaKnown RBP12.6□□□□□ -0.39
COMMD4-225ENST00000569245 ERVK-25P63136 954 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 IL5RAQ01344 420 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 CD47Q08722 323 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 SNAPC1Q16533 368 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 SLC25A30Q5SVS4 291 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 GPR139Q6DWJ6 353 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 KRT80Q6KB66 452 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 NHLRC1Q6VVB1 395 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 B3GLCTQ6Y288 498 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 ZNF813Q6ZN06 617 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 BIVMQ86UB2 503 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 IGFN1Q86VF2 1251 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 ADAD1Q96M93 576 aaKnown RBP12.6□□□□□ -0.39
COMMD4-225ENST00000569245 ERMAPQ96PL5 475 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-225ENST00000569245 TXNIPQ9H3M7 391 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 CMC2Q9NRP2 79 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 IER3IP1Q9Y5U9 82 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 ARID1AO14497 2285 aa12.6□□□□□ -0.39
COMMD4-225ENST00000569245 SETD2Q9BYW2 2564 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-225ENST00000569245 A0A1W2PRG6 482 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 BCL10O95999 233 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 IFNGP01579 166 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 CD79AP11912 226 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 SDHAP31040 664 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 RIPPLY3P57055 190 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 CDK5R2Q13319 367 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 MELKQ14680 651 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 ZNF362Q5T0B9 420 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-225ENST00000569245 ZNF544Q6NX49 715 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 PTCHD4Q6ZW05 846 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 DTX2Q86UW9 622 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 WDFY1Q8IWB7 410 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 CCDC36Q8IYA8 594 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 TCEANCQ8N8B7 351 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms