RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SLC7A8Q9UHI5 535 aa10.22□□□□□ -0.77
RAB5C-204ENST00000547517 SPEF1Q9Y4P9 236 aa10.22□□□□□ -0.77
RAB5C-204ENST00000547517 MAP1AP78559 2803 aaPredicted RBP10.22□□□□□ -0.77
RAB5C-204ENST00000547517 MED13LQ71F56 2210 aa10.22□□□□□ -0.77
RAB5C-204ENST00000547517 FLNAP21333 2647 aaKnown RBP10.21□□□□□ -0.77
RAB5C-204ENST00000547517 IQCMA0A1B0GVH7 501 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 SMAD7O15105 426 aaKnown RBP10.21□□□□□ -0.77
RAB5C-204ENST00000547517 SSX4O60224 188 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 SLC16A7O60669 478 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 TXNDC12O95881 172 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 FAM157BP0CG42 384 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 APEHP13798 732 aaKnown RBP10.21□□□□□ -0.77
RAB5C-204ENST00000547517 NR4A1P22736 598 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 NOS3P29474 1203 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 APLNRP35414 380 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 HMGA2P52926 109 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 RAB35Q15286 201 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 EFNB3Q15768 340 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 SWI5Q1ZZU3 235 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 TBC1D28Q2M2D7 210 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 MST1LQ2TV78 715 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 CLEC12AQ5QGZ9 265 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 FAM27BQ5VT28 67 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 OTPQ5XKR4 325 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 LEG1Q6P5S2 330 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 SVOPLQ8N434 492 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 PAQR4Q8N4S7 273 aaPredicted RBP10.21□□□□□ -0.77
RAB5C-204ENST00000547517 OR52L1Q8NGH7 329 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 AKR7LQ8NHP1 331 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 CANT1Q8WVQ1 401 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 C18orf12Q96KH6 178 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 BDH2Q9BUT1 245 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 CADM1Q9BY67 442 aaKnown RBP10.21□□□□□ -0.77
RAB5C-204ENST00000547517 C1orf198Q9H425 327 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 PLK3Q9H4B4 646 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 EMC7Q9NPA0 242 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 POLE4Q9NR33 117 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 VSX1Q9NZR4 365 aaPredicted RBP10.21□□□□□ -0.77
RAB5C-204ENST00000547517 POMPQ9Y244 141 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 CDH10Q9Y6N8 788 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 PMF1-BGLAPU3KQ54 211 aa10.21□□□□□ -0.77
RAB5C-204ENST00000547517 VSTM5A8MXK1 200 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 B9A039 149 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 AHCYL1O43865 530 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 MGRN1O60291 552 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 KHDRBS3O75525 346 aaKnown RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 LY6HO94772 140 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 SOX14O95416 240 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 CST1P01037 141 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 PTHP01270 115 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 GASTP01350 101 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 SCG5P05408 212 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 CST2P09228 141 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 INHBBP09529 407 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 CCNOP22674 350 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 APEX1P27695 318 aaKnown RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 CDKN2AP42771 156 aaKnown RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 CENPAP49450 140 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 RPS23P62266 143 aaKnown RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 TNK1Q13470 666 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 ENDOGQ14249 297 aaKnown RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 MSMPQ1L6U9 139 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 ZNF770Q6IQ21 691 aaPredicted RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 UGT2A3Q6UWM9 527 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 LINC00471Q8N535 108 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 ICA1LQ8NDH6 482 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 CPEB3Q8NE35 698 aaKnown RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 SDR9C7Q8NEX9 313 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 OR10G2Q8NGC3 310 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 COX4I2Q96KJ9 171 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 SORCS2Q96PQ0 1159 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 SMR3AQ99954 134 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 VRK1Q99986 396 aaPredicted RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 SYT3Q9BQG1 590 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 ZNF416Q9BWM5 594 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 OR2H1Q9GZK4 316 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 NUAK2Q9H093 628 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 FN3KQ9H479 309 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 GSX1Q9H4S2 264 aaPredicted RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 DYNLRB1Q9NP97 96 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 TBC1D23Q9NUY8 699 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 FZR1Q9UM11 496 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 COA3Q9Y2R0 106 aaPredicted RBP10.2□□□□□ -0.78
RAB5C-204ENST00000547517 CMAHPQ9Y471 501 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 FKBP7Q9Y680 259 aa10.2□□□□□ -0.78
RAB5C-204ENST00000547517 C12orf71A8MTZ7 269 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 GNGT2O14610 69 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 ARPC3O15145 178 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 GSC2O15499 205 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 SNAP29O95721 258 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 GPANK1O95872 356 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 RENP00797 406 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 FOSL1P15407 271 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 HIST1H1CP16403 213 aaKnown RBP10.19□□□□□ -0.78
RAB5C-204ENST00000547517 STOMP27105 288 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 GLRXP35754 106 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 RASSF2P50749 326 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 PCBD1P61457 104 aa10.19□□□□□ -0.78
RAB5C-204ENST00000547517 PSG4Q00888 419 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms