RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 RNF183Q96D59 192 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 GMPPAQ96IJ6 420 aaPredicted RBP4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 DACH2Q96NX9 599 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 OR5B2Q96R09 309 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 ZBTB18Q99592 522 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 PIGMQ9H3S5 423 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 A4GALTQ9NPC4 353 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 EXOSC3Q9NQT5 275 aaKnown RBP4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 FGFR1OP2Q9NVK5 253 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 SEC14L4Q9UDX3 406 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 LIPT1Q9Y234 373 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 ZNF443Q9Y2A4 671 aaPredicted RBP4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 SLC35A3Q9Y2D2 325 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 PLEKHA6Q9Y2H5 1048 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 TMED7Q9Y3B3 224 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 GMEB1Q9Y692 573 aa4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 FN1P02751 2386 aaKnown RBP4.39□□□□□ -1.71
GCSHP4-201ENST00000538792 IGKV1D-42A0A075B6H8 117 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 IGKV3D-15A0A087WSY6 115 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 A0A0G2JND7 137 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 A0A1W2PP18 115 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 FAM90A7PA6NKC0 464 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 FAM90A22PA8MWA6 464 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 FAM90A12PA8MX19 464 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 FAM90A23PA8MXZ1 464 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 H3BNH8 94 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 FAAHO00519 579 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 NPIPB7O75200 414 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 LYPD3O95274 346 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 SYNGR4O95473 234 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 ANP32DO95626 131 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 KRT75O95678 551 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 AGR2O95994 175 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 THY1P04216 161 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 DBIP07108 87 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 YES1P07947 543 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 SNRNP70P08621 437 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 PABPC4LP0CB38 370 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 POU2F1P14859 743 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 IL7RP16871 459 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 GPX2P18283 190 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 CD53P19397 219 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 NCF2P19878 526 aaPredicted RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 PGCP20142 388 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 CRYGSP22914 178 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 ME2P23368 584 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 APOBEC1P41238 236 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 SLC1A3P43003 542 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 MTPNP58546 118 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 LGALS3BPQ08380 585 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 DMTNQ08495 405 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 LRRC74AQ0VAA2 488 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 CAPRIN1Q14444 709 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 SQLEQ14534 574 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 NPTX1Q15818 432 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 ZNF718Q3SXZ3 478 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 C3orf33Q6P1S2 294 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 CHMP1BQ7LBR1 199 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 GRINAQ7Z429 371 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 RBM45Q8IUH3 476 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 ARFGAP2Q8N6H7 521 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 TRIML2Q8N7C3 387 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 GPR32P1Q8NGA4 272 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 DYDC1Q8WWB3 177 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 CPNE4Q96A23 557 aaPredicted RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 ZC3HAV1LQ96H79 300 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 ZNF317Q96PQ6 595 aaPredicted RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 CGREF1Q99674 301 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 SLC39A3Q9BRY0 314 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 KLHL4Q9C0H6 718 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 CXXC4Q9H2H0 198 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 HEATR1Q9H583 2144 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 RMND5AQ9H871 391 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 BCL2L10Q9HD36 194 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 MDFICQ9P1T7 246 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 P2RX2Q9UBL9 471 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 CHRNA9Q9UGM1 479 aa4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 MCTS1Q9ULC4 181 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 SONP18583 2426 aaKnown RBP4.38□□□□□ -1.71
GCSHP4-201ENST00000538792 IGLV5-37A0A075B6J1 123 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 A0A0G2JPF8 293 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 CFAP73A6NFT4 308 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 LIPT2A6NK58 231 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 HNRNPCL2B2RXH8 293 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 HNRNPCL3B7ZW38 293 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 NPIPB11E5RHQ5 1161 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 FTCDNL1E5RQL4 147 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 LRRN3E7EW58 273 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 C16orf97H3BN30 126 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 PDLIM1O00151 329 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 SULT2B1O00204 365 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 HNRNPCL1O60812 293 aaKnown RBP4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 LYZL6O75951 148 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 MFN2O95140 757 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 PMS2P2O95744 297 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 CH25HO95992 272 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 IGKV3-20P01619 116 aa4.37□□□□□ -1.71
GCSHP4-201ENST00000538792 IGHV3-9P01782 118 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms