RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 IGHV3-38A0A0C4DH36 116 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 WDR91A4D1P6 747 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 DHRS7CA6NNS2 312 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 SMKR1H3BMG3 65 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 DFFAO00273 331 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 MRPS12O15235 138 aaKnown RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 ALOX12BO75342 701 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 EIF3GO75821 320 aaKnown RBP eCLIP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 RPP14O95059 124 aaKnown RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 NADKO95544 446 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 ACTL6AO96019 429 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 RENP00797 406 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 GP1BAP07359 652 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 PSKH1P11801 424 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 PAX1P15863 534 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 PVALBP20472 110 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 CHRNB4P30926 498 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 HOXA6P31267 233 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 PRKAR2BP31323 418 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 CDKN2AP42771 156 aaKnown RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 BTDP43251 543 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 HCAR3P49019 387 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 RGS6P49758 472 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 GSK3BP49841 420 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 GDI2P50395 445 aaKnown RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 PRELPP51888 382 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 DLX5P56178 289 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 MAGOHP61326 146 aaKnown RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 REEP5Q00765 189 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 PRKCDQ05655 676 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 UNC119Q13432 240 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 SLC39A6Q13433 755 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 CLINT1Q14677 625 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 SNCBQ16143 134 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 MICAQ29983 383 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 GOLGA7BQ2TAP0 167 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 CLVS2Q5SYC1 327 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 CEP85LQ5SZL2 805 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 UBE2UQ5VVX9 321 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 BSPRYQ5W0U4 402 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 RESP18Q5W5W9 173 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 TTC33Q6PID6 262 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF677Q86XU0 584 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 PIANPQ8IYJ0 282 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 PGAM4Q8N0Y7 254 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 CIARTQ8N365 385 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 MRGPRDQ8TDS7 321 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 TFB1MQ8WVM0 346 aaKnown RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 ARPC1AQ92747 370 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 RCN3Q96D15 328 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 SLC25A38Q96DW6 304 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 CMTM5Q96DZ9 223 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 ADTRPQ96IZ2 230 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 C20orf173Q96LM9 149 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 OR51V1Q9H2C8 321 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 DSN1Q9H410 356 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 C6orf106Q9H6K1 298 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 TREX1Q9NSU2 369 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 EXD2Q9NVH0 621 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 NLE1Q9NVX2 485 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 SPRR3Q9UBC9 169 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 MUTYHQ9UIF7 546 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 ASF1AQ9Y294 204 aa2.97□□□□□ -1.93
HMGB1P22-201ENST00000505315 ELP1O95163 1332 aa2.96□□□□□ -1.93
HMGB1P22-201ENST00000505315 ABCB11O95342 1321 aa2.96□□□□□ -1.93
HMGB1P22-201ENST00000505315 MAP3K15Q6ZN16 1313 aa2.96□□□□□ -1.93
HMGB1P22-201ENST00000505315 IGHV3OR16-12A0A075B7B8 117 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 ANKRD20A5PA0PJZ0 165 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 PRR23AA6NEV1 266 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 A6NIZ1 184 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 VGLL3A8MV65 326 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZNF705EA8MWA4 302 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 CENPBD1B2RD01 187 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 ANKRD63C9JTQ0 380 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 CLDN34H7C241 214 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 NME4O00746 187 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 NUPL2O15504 423 aaKnown RBP2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 RAD51CO43502 376 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 SLC16A7O60669 478 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 DPM1O60762 260 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 ICOSLGO75144 302 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 RDH16O75452 317 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 LYPLA2O95372 231 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 RPS17P08708 135 aaKnown RBP2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR8U9P0C7N5 309 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 SMIM10L1P0DMW3 83 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 GGT1P19440 569 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 RAB5AP20339 215 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 CXCR2P25025 360 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR1D4P47884 311 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 ALDH3B2P48448 385 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 AP1S2P56377 157 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 RAP1BP61224 184 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 ERVK11-1P61568 191 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 RHOAP61586 193 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 SELENOTP62341 195 aa2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 RPL10AP62906 217 aaKnown RBP2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 RPL32P62910 135 aaKnown RBP2.96□□□□□ -1.94
HMGB1P22-201ENST00000505315 IRX1P78414 480 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms