RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 C1orf198Q9H425 327 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 CDH20Q9HBT6 801 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 DYNLRB1Q9NP97 96 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 IL1RAPQ9NPH3 570 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 NRIP3Q9NQ35 241 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 FAM53CQ9NYF3 392 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 AURKCQ9UQB9 309 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 TEX13CA0A0J9YWL9 993 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 PRSS37A4D1T9 235 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 XKRYO14609 159 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 SYNGR3O43761 229 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 CD5LO43866 347 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 TP53P04637 393 aaPredicted RBP11.08□□□□□ -0.64
HDAC1-209ENST00000484305 CST2P09228 141 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 ATP6V1B2P21281 511 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 STOMP27105 288 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 RRM2P31350 389 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 APLNRP35414 380 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 ALDH3B1P43353 468 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 SMIM11AP58511 58 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 ERVS71-1P61550 626 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 PPP2R2BQ00005 443 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 PSG4Q00888 419 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 ENDOGQ14249 297 aaKnown RBP11.08□□□□□ -0.64
HDAC1-209ENST00000484305 MAD2L1BPQ15013 274 aaPredicted RBP11.08□□□□□ -0.64
HDAC1-209ENST00000484305 KRTAP21-3Q3LHN1 58 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 ZER1Q7Z7L7 766 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 ZDHHC21Q8IVQ6 265 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 OR1J2Q8NGS2 313 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 AKR7LQ8NHP1 331 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
HDAC1-209ENST00000484305 FOXN4Q96NZ1 517 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 PIMREGQ9BSJ6 248 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 OR2H1Q9GZK4 316 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 NDEL1Q9GZM8 345 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 TPK1Q9H3S4 243 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 MYOZ1Q9NP98 299 aaPredicted RBP11.08□□□□□ -0.64
HDAC1-209ENST00000484305 KRCC1Q9NPI7 259 aaPredicted RBP11.08□□□□□ -0.64
HDAC1-209ENST00000484305 ACTR3BQ9P1U1 418 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 REV1Q9UBZ9 1251 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 DUSP13Q9UII6 198 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 IER3IP1Q9Y5U9 82 aa11.08□□□□□ -0.64
HDAC1-209ENST00000484305 LOC100509620A0A075B734 347 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 LOC390937A0A1W2PQ73 354 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 TCRBV5S2A0A599 114 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 M0R233 179 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 NDUFS8O00217 210 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 SOCS2O14508 198 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 IMPA2O14732 288 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 CLPTM1O96005 669 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 LCKP06239 509 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 ERCC1P07992 297 aaPredicted RBP11.07□□□□□ -0.64
HDAC1-209ENST00000484305 DAOP14920 347 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 CTLA4P16410 223 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 MSR1P21757 451 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 USF1P22415 310 aaPredicted RBP11.07□□□□□ -0.64
HDAC1-209ENST00000484305 CCNOP22674 350 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 CALB2P22676 271 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 SDHAP31040 664 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 GUCA1AP43080 201 aaPredicted RBP11.07□□□□□ -0.64
HDAC1-209ENST00000484305 NR4A2P43354 598 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 UCP2P55851 309 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 MS4A2Q01362 244 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 KRR1Q13601 381 aaKnown RBP11.07□□□□□ -0.64
HDAC1-209ENST00000484305 TMEM249Q2WGJ8 235 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 GPR139Q6DWJ6 353 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 RGS7BPQ6MZT1 257 aaPredicted RBP11.07□□□□□ -0.64
HDAC1-209ENST00000484305 UGT2A3Q6UWM9 527 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 POM121L2Q96KW2 1035 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 GPX7Q96SL4 187 aaPredicted RBP11.07□□□□□ -0.64
HDAC1-209ENST00000484305 ZNF416Q9BWM5 594 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 WNT5BQ9H1J7 359 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 LRMDAQ9H2I8 198 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 EMC7Q9NPA0 242 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 POLE4Q9NR33 117 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 TIMM10BQ9Y5J6 103 aa11.07□□□□□ -0.64
HDAC1-209ENST00000484305 MALRD1Q5VYJ5 2156 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 C5orf49A4QMS7 147 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 LYNX1G3V0Z9 82 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 AHCYL1O43865 530 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 OR10H3O60404 316 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 SLC16A7O60669 478 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 STAMBPO95630 424 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 LYNX1P0DP58 116 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 NAT2P11245 290 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 ZNF250P15622 560 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 WNT5AP41221 380 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 CDKN2AP42771 156 aaKnown RBP11.06□□□□□ -0.64
HDAC1-209ENST00000484305 RAD52P43351 418 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 PCBD1P61457 104 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 GGTLC2Q14390 218 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 ALKBH6Q3KRA9 238 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 OTPQ5XKR4 325 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 ZNF774Q6NX45 483 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 SMARCD3Q6STE5 483 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 DPY19L2P2Q6ZN68 376 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 PTCHD4Q6ZW05 846 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 ZNF101Q8IZC7 436 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 ICA1LQ8NDH6 482 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 BCL2L14Q9BZR8 327 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms