RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 TIGITQ495A1 244 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 EOGTQ5NDL2 527 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 WDR25Q64LD2 544 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-215ENST00000476664 ADAMTSL5Q6ZMM2 481 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 TIPARPQ7Z3E1 657 aaKnown RBP5.71□□□□□ -1.5
LRCH3-215ENST00000476664 CYP4Z1Q86W10 505 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 PLCZ1Q86YW0 608 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 KRT222Q8N1A0 295 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 MAPK15Q8TD08 544 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 TCTEX1D2Q8WW35 142 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 TOMM40LQ969M1 308 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 UCK2Q9BZX2 261 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 HOXD1Q9GZZ0 328 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 NAT10Q9H0A0 1025 aaKnown RBP5.71□□□□□ -1.5
LRCH3-215ENST00000476664 PIGUQ9H490 435 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 ZNF385DQ9H6B1 395 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 ATP13A3Q9H7F0 1226 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 PSTPIP2Q9H939 334 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 WRAP73Q9P2S5 460 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-215ENST00000476664 UXTQ9UBK9 157 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-215ENST00000476664 KIF25Q9UIL4 384 aa5.71□□□□□ -1.5
LRCH3-215ENST00000476664 NUP210Q8TEM1 1887 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-215ENST00000476664 MAP1AP78559 2803 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-215ENST00000476664 CSPG4Q6UVK1 2322 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 C1orf232A0A0U1RR37 186 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 A0A1B0GUS0 222 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 NPIPB8E9PQR5 432 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 DYNC1I1O14576 645 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 ZBTB5O15062 677 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 SOX15O60248 233 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 OR7A10O76100 309 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 VAPBO95292 243 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 SDC1P18827 310 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 SERPINA2P20848 420 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 PROZP22891 400 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 FASP25445 335 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 CD40LGP29965 261 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 PCK1P35558 622 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 YAP1P46937 504 aaKnown RBP5.7□□□□□ -1.5
LRCH3-215ENST00000476664 HAAOP46952 286 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 NOVP48745 357 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 INHBCP55103 352 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 RND3P61587 244 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 PAX2Q02962 417 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 ART3Q13508 389 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 PAGE2BQ5JRK9 111 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 FHL5Q5TD97 284 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 PXDC1Q5TGL8 231 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 PVRIGQ6DKI7 326 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 SPESP1Q6UW49 350 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 Q6ZSR3 168 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 TUBA1AQ71U36 451 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 SLC35D2Q76EJ3 337 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 ZNF100Q8IYN0 542 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 ZNF564Q8TBZ8 553 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-215ENST00000476664 TCP10LQ8TDR4 215 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 HTR3CQ8WXA8 447 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 UFD1Q92890 307 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 LRRC45Q96CN5 670 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 SH3GL1Q99961 368 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 ECSITQ9BQ95 431 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 MED10Q9BTT4 135 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 ANGPTL4Q9BY76 406 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 UCK1Q9HA47 277 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 NTN4Q9HB63 628 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 SAMSN1Q9NSI8 373 aaKnown RBP5.7□□□□□ -1.5
LRCH3-215ENST00000476664 MS4A12Q9NXJ0 267 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 RBAKQ9NYW8 714 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-215ENST00000476664 PSMD13Q9UNM6 376 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 DMRT1Q9Y5R6 373 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 CDH10Q9Y6N8 788 aa5.7□□□□□ -1.5
LRCH3-215ENST00000476664 GOLGA8RI6L899 631 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 SCAMP2O15127 329 aaKnown RBP5.69□□□□□ -1.5
LRCH3-215ENST00000476664 RAMP2O60895 175 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 SCN2BO60939 215 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 MYO1DO94832 1006 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 C1orf105O95561 183 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 OXSR1O95747 527 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-215ENST00000476664 CST4P01036 141 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 RPN2P04844 631 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 GOLGA8HP0CJ92 632 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 IL12AP29459 219 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 ELK3P41970 407 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 GPR1P46091 355 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 POU3F4P49335 361 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 KPNA2P52292 529 aaKnown RBP5.69□□□□□ -1.5
LRCH3-215ENST00000476664 PKNOX1P55347 436 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 ZNF33BQ06732 778 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 PMS2P3Q13401 168 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 TEAD2Q15562 447 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 PSMD5Q16401 504 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 QRICH1Q2TAL8 776 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 PAN3Q58A45 887 aaKnown RBP5.69□□□□□ -1.5
LRCH3-215ENST00000476664 SAMD4BQ5PRF9 694 aaKnown RBP5.69□□□□□ -1.5
LRCH3-215ENST00000476664 TMPRSS11AQ6ZMR5 421 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 PRSS48Q7RTY5 328 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 MS4A15Q8N5U1 240 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 METTL13Q8N6R0 699 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 CSNK1A1LQ8N752 337 aa5.69□□□□□ -1.5
LRCH3-215ENST00000476664 CATSPER1Q8NEC5 780 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms