RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PATL1Q86TB9 770 aaKnown RBP5.14□□□□□ -1.59
HDAC3-206ENST00000471968 SNX32Q86XE0 403 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 SLC22A24Q8N4F4 322 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 BOLLQ8N9W6 283 aaKnown RBP5.14□□□□□ -1.59
HDAC3-206ENST00000471968 VPS37AQ8NEZ2 397 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 ATP6V1E2Q96A05 226 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 PHF21BQ96EK2 531 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 CDRT15Q96T59 188 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 EMC6Q9BV81 110 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 C1QTNF3Q9BXJ4 246 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 MIEF1Q9NQG6 463 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 VNN3Q9NY84 501 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 FAM53CQ9NYF3 392 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 TFR2Q9UP52 801 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 C5orf49A4QMS7 147 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 SH2D7A6NKC9 451 aaPredicted RBP5.13□□□□□ -1.59
HDAC3-206ENST00000471968 SMTNL1A8MU46 457 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 MS4A18H0YCH9 400 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 H3BSA7 217 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 AKAP8O43823 692 aaKnown RBP5.13□□□□□ -1.59
HDAC3-206ENST00000471968 PSPNO60542 156 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 GYPAP02724 150 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 SERPINE1P05121 402 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 IFI6P09912 130 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 MLNP12872 115 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 PGAM1P18669 254 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 AHCYP23526 432 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 STOMP27105 288 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 OR3A4PP47883 348 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 FNTAP49354 379 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 SRP9P49458 86 aaKnown RBP5.13□□□□□ -1.59
HDAC3-206ENST00000471968 MVDP53602 400 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 ATP6V0D1P61421 351 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 EWSR1Q01844 656 aaKnown RBP eCLIP5.13□□□□□ -1.59
HDAC3-206ENST00000471968 HSF2Q03933 536 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 C2orf80Q0P641 193 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 LASP1Q14847 261 aaKnown RBP5.13□□□□□ -1.59
HDAC3-206ENST00000471968 OR8B8Q15620 311 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 GPR68Q15743 365 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 C11orf91Q3C1V1 193 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 SLC36A2Q495M3 483 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 ABCA11PQ4W5N1 156 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 FAM219BQ5XKK7 198 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 C4orf22Q6V702 233 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 GSTA5Q7RTV2 222 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 DYNAPQ8N1N2 210 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 OR6N1Q8NGY5 312 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 PNPT1Q8TCS8 783 aaKnown RBP5.13□□□□□ -1.59
HDAC3-206ENST00000471968 SELENOMQ8WWX9 145 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 ANP32BQ92688 251 aaKnown RBP5.13□□□□□ -1.59
HDAC3-206ENST00000471968 CERS2Q96G23 380 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 DMRTB1Q96MA1 342 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 STACQ99469 402 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 MECRQ9BV79 373 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 TMED9Q9BVK6 235 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 TRIM5Q9C035 493 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 PIGUQ9H490 435 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 IKZF5Q9H5V7 419 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 METTL8Q9H825 291 aaKnown RBP5.13□□□□□ -1.59
HDAC3-206ENST00000471968 TUBA4BQ9H853 241 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 NOL11Q9H8H0 719 aaKnown RBP5.13□□□□□ -1.59
HDAC3-206ENST00000471968 DUSP22Q9NRW4 184 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 NMRK1Q9NWW6 199 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 KCNE5Q9UJ90 142 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 NFU1Q9UMS0 254 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 KCNE3Q9Y6H6 103 aa5.13□□□□□ -1.59
HDAC3-206ENST00000471968 M0R2N4 97 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 OR7A17O14581 309 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 AP3D1O14617 1153 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 FARS2O95363 451 aaKnown RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 WISP3O95389 354 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 GYPCP04921 128 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 TPM3P06753 285 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 SNRPAP09012 282 aaKnown RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 PNMTP11086 282 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 NCF2P19878 526 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 CXCR5P32302 372 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 PGM1P36871 562 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 SLC12A2P55011 1212 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 POU4F2Q12837 409 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 BNIP2Q12982 314 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 KRT72Q14CN4 511 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 LAPTM4AQ15012 233 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 RNASEH2BQ5TBB1 312 aaKnown RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 CAVIN1Q6NZI2 390 aaKnown RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 ZCCHC12Q6PEW1 402 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 SLC16A14Q7RTX9 510 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 LHFPL4Q7Z7J7 247 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 ZC3HC1Q86WB0 502 aaKnown RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 CNGA4Q8IV77 575 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 LRRC8AQ8IWT6 810 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 OR5AS1Q8N127 324 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 OR7A2PQ8NGA2 310 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 OR6Q1Q8NGQ2 317 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 ZNF417Q8TAU3 575 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 STAG3L4Q8TBR4 150 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 UTP4Q969X6 686 aaKnown RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 SLC25A36Q96CQ1 311 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 CCDC42Q96M95 316 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 OXGR1Q96P68 337 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms