RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	RFX4	Q33E94	735 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	C3orf36	Q3SXR2	165 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	THEM4	Q5T1C6	240 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	GPR139	Q6DWJ6	353 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	C1orf94	Q6P1W5	598 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	LEG1	Q6P5S2	330 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	DPY19L2P2	Q6ZN68	376 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	SKA3	Q8IX90	412 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	MAPK1IP1L	Q8NDC0	245 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	OR4C15	Q8NGM1	316 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	FNDC8	Q8TC99	324 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	GIPC3	Q8TF64	312 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	MS4A3	Q96HJ5	214 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	SYT4	Q9H2B2	425 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	NOX3	Q9HBY0	568 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	KIF17	Q9P2E2	1029 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	CRNN	Q9UBG3	495 aa	Predicted RBP	11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	POLR1D	Q9Y2S0	133 aa		11.02	□□□□□ -0.65
FDPS-204	ENST00000461507	IGHV4-30-2	A0A087WSY4	118 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507		H3BN98	237 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	SSX4	O60224	188 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	SLC16A7	O60669	478 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	PTP4A3	O75365	173 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	TIPRL	O75663	272 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	REN	P00797	406 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	GAST	P01350	101 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	NPR2	P20594	1047 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	APOBEC3A	P31941	199 aa	Predicted RBP	11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	GSS	P48637	474 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	ARHGDIA	P52565	204 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	NUDT6	P53370	316 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	GALK2	Q01415	458 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	PLP2	Q04941	152 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	SLC35F1	Q5T1Q4	408 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	C10orf128	Q5T292	105 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	KRT80	Q6KB66	452 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF620	Q6ZNG0	422 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	ADCK1	Q86TW2	530 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	MYPOP	Q86VE0	399 aa	Predicted RBP	11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	FAM169B	Q8N8A8	192 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	ICA1L	Q8NDH6	482 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	SDR9C7	Q8NEX9	313 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	OR4K13	Q8NH42	304 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	RHNO1	Q9BSD3	238 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	OR51B6	Q9H340	312 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF556	Q9HAH1	456 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	SMURF2	Q9HAU4	748 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	CDH20	Q9HBT6	801 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	NRIP3	Q9NQ35	241 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	PDP1	Q9P0J1	537 aa	Predicted RBP	11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	CDH10	Q9Y6N8	788 aa		11.01	□□□□□ -0.65
FDPS-204	ENST00000461507	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11	□□□□□ -0.65	2e-10	■■■□□ 14.6
FDPS-204	ENST00000461507	IQCM	A0A1B0GVH7	501 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	TCRBV3S1	A0A5B6	114 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	SLC22A23	A1A5C7	686 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	PRSS37	A4D1T9	235 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	IGKV3-15	P01624	115 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	IGLV1-44	P01699	117 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	CSF3	P09919	207 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	SLC25A16	P16260	332 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	HOXB6	P17509	224 aa	Known RBP	11	□□□□□ -0.65
FDPS-204	ENST00000461507	GSTM3	P21266	225 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	CCNO	P22674	350 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	POU1F1	P28069	291 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	LAP3	P28838	519 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	CALCR	P30988	508 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	FXYD6P3	P58550	94 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	LOXL1	Q08397	574 aa	Predicted RBP	11	□□□□□ -0.65
FDPS-204	ENST00000461507	SNTB2	Q13425	540 aa	Known RBP	11	□□□□□ -0.65
FDPS-204	ENST00000461507	HIST3H3	Q16695	136 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	SWI5	Q1ZZU3	235 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	RPL13AP3	Q6NVV1	102 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	DNM1P34	Q6PK57	102 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	SLC25A47	Q6Q0C1	308 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	CLEC2A	Q6UVW9	174 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	FAM122B	Q7Z309	247 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	ATG16L2	Q8NAA4	619 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	FGFBP3	Q8TAT2	258 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	TEX47	Q8TBZ9	253 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	FBXO17	Q96EF6	278 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	GPX7	Q96SL4	187 aa	Predicted RBP	11	□□□□□ -0.65
FDPS-204	ENST00000461507	MDFI	Q99750	246 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	FN3K	Q9H479	309 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	EMC7	Q9NPA0	242 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	ARMC1	Q9NVT9	282 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	STAB1	Q9NY15	2570 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	RTTN	Q86VV8	2226 aa		11	□□□□□ -0.65
FDPS-204	ENST00000461507	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	IMPA2	O14732	288 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	DEAF1	O75398	565 aa	Predicted RBP	10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	KHDRBS3	O75525	346 aa	Known RBP	10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	HLA-DQA2	P01906	255 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	TP53	P04637	393 aa	Predicted RBP	10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	BMP4	P12644	408 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	CCL2	P13500	99 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	HIST1H1C	P16403	213 aa	Known RBP	10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	CTLA4	P16410	223 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	MSR1	P21757	451 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	APLNR	P35414	380 aa		10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms