RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 LSSP48449 732 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 NNATQ16517 81 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 C2orf76Q3KRA6 126 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 SFTPA2Q8IWL1 248 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 OR6N2Q8NGY6 317 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 RNF141Q8WVD5 230 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 HDAC8Q9BY41 377 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 OR51M1Q9H341 326 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 PRR13Q9NZ81 148 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 NOSIPQ9Y314 301 aaKnown RBP15.48■□□□□ 0.07
PTPRA-205ENST00000399903 C17orf113A0A1B0GUU1 675 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 DCDC2BA2VCK2 349 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 EFCAB7A8K855 629 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 ZNF736B4DX44 427 aaPredicted RBP15.48■□□□□ 0.07
PTPRA-205ENST00000399903 SULT2B1O00204 365 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 OIP5O43482 229 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 LDB3O75112 727 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 CD2P06729 351 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 NGFRP08138 427 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 COL9A1P20849 921 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 GABRA3P34903 492 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 PGDP52209 483 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 TMPPEQ6ZT21 453 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 ZNF765Q7L2R6 523 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 RTL10Q7L3V2 364 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 CHST4Q8NCG5 386 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 OR5AP2Q8NGF4 316 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 FOXRED1Q96CU9 486 aaPredicted RBP15.48■□□□□ 0.07
PTPRA-205ENST00000399903 KCNE5Q9UJ90 142 aa15.48■□□□□ 0.07
PTPRA-205ENST00000399903 ARHGEF17Q96PE2 2063 aaPredicted RBP15.48■□□□□ 0.07
PTPRA-205ENST00000399903 IGKV1-8A0A0C4DH67 115 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 CLEC3AO75596 197 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 NME1P15531 152 aaKnown RBP15.47■□□□□ 0.07
PTPRA-205ENST00000399903 ZNF44P15621 663 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 HYAL1Q12794 435 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 DEFB134Q4QY38 66 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 DCST2Q5T1A1 773 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 OR4K17Q8NGC6 315 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 ROBO4Q8WZ75 1007 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 TSACCQ96A04 125 aaPredicted RBP15.47■□□□□ 0.07
PTPRA-205ENST00000399903 LINC00615Q96LM1 132 aaPredicted RBP15.47■□□□□ 0.07
PTPRA-205ENST00000399903 CMTM3Q96MX0 182 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 FGF22Q9HCT0 170 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 PRDM7Q9NQW5 492 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 KLHDC2Q9Y2U9 406 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 A0A0A6YYC8 382 aaPredicted RBP15.47■□□□□ 0.07
PTPRA-205ENST00000399903 I3L1I5 382 aaPredicted RBP15.47■□□□□ 0.07
PTPRA-205ENST00000399903 K7EQS6 105 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 EEF1A1P68104 462 aaKnown RBP15.47■□□□□ 0.07
PTPRA-205ENST00000399903 PPP1R1AQ13522 171 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 ITPRIPL2Q3MIP1 535 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 TMEM196Q5HYL7 178 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 UNQ9370/PRO34162Q6UXP9 181 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 TMPRSS11FQ6ZWK6 438 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 ZAR1Q86SH2 424 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 BAP18Q8IXM2 172 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 RNF113BQ8IZP6 322 aaKnown RBP15.47■□□□□ 0.07
PTPRA-205ENST00000399903 RHOVQ96L33 236 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 SYT4Q9H2B2 425 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 SEMA6CQ9H3T2 930 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 FRRS1LQ9P0K9 344 aa15.47■□□□□ 0.07
PTPRA-205ENST00000399903 CGGBP1Q9UFW8 167 aaPredicted RBP15.47■□□□□ 0.07
PTPRA-205ENST00000399903 TMEM235A6NFC5 223 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 NDUFB2O95178 105 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 HLA-DQA2P01906 255 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 KLK3P07288 261 aaPredicted RBP15.46■□□□□ 0.07
PTPRA-205ENST00000399903 ADAMTSL4Q6UY14 1074 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 LRRC25Q8N386 305 aaPredicted RBP15.46■□□□□ 0.07
PTPRA-205ENST00000399903 POMGNT2Q8NAT1 580 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 PPP1R14AQ96A00 147 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 FAM3DQ96BQ1 224 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 NRIP2Q9BQI9 281 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 ALG12Q9BV10 488 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 SMCO4Q9NRQ5 59 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 ASH2LQ9UBL3 628 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 COLCA2A8K830 154 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 DIO1P49895 249 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 ZNF542PQ5EBM4 170 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 LRRC69Q6ZNQ3 347 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 MISPQ8IVT2 679 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 ZNF615Q8N8J6 731 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 SLC2A12Q8TD20 617 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 INTS12Q96CB8 462 aaKnown RBP15.46■□□□□ 0.07
PTPRA-205ENST00000399903 CMKLR1Q99788 373 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 SULT4A1Q9BR01 284 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 SLC17A9Q9BYT1 436 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 MSRAQ9UJ68 235 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 TRIOBPQ9H2D6 2365 aa15.46■□□□□ 0.07
PTPRA-205ENST00000399903 DNAJB6O75190 326 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 MED6O75586 246 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 WNT11O96014 354 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 ITGA5P08648 1049 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 IGFALSP35858 605 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 RBM34P42696 430 aaKnown RBP15.46■□□□□ 0.06
PTPRA-205ENST00000399903 TAS2R19P59542 299 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 DEFA6Q01524 100 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 ALKBH1Q13686 389 aaKnown RBP15.46■□□□□ 0.06
PTPRA-205ENST00000399903 KLHL26Q53HC5 615 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 OR2B11Q5JQS5 317 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 JAZF1Q86VZ6 243 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms