RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ZBTB46Q86UZ6 589 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 CDC20BQ86Y33 519 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 CBR4Q8N4T8 237 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 NOX3Q9HBY0 568 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 USE1Q9NZ43 259 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 RNF115Q9Y4L5 304 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 ORC6Q9Y5N6 252 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 FBN2P35556 2912 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 ABCD4O14678 606 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 PLAUP00749 431 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 IGLV1-44P01699 117 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 ALPLP05186 524 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 SCG5P05408 212 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 CST2P09228 141 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 ANPEPP15144 967 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 IDH3GP51553 393 aaPredicted RBP16.71■□□□□ 0.27
HOXA9-202ENST00000396345 ALDH3A2P51648 485 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 KRTAP10-9P60411 292 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 DBPQ10586 325 aaPredicted RBP16.71■□□□□ 0.27
HOXA9-202ENST00000396345 ZNF771Q7L3S4 317 aaPredicted RBP16.71■□□□□ 0.27
HOXA9-202ENST00000396345 PROKR2Q8NFJ6 384 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 OR9Q1Q8NGQ5 310 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 OR2T4Q8NH00 348 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 EME1Q96AY2 570 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 PLEKHA8Q96JA3 519 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 TMEM204Q9BSN7 226 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 HEATR1Q9H583 2144 aaKnown RBP16.71■□□□□ 0.27
HOXA9-202ENST00000396345 EMC7Q9NPA0 242 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 CCNB1IP1Q9NPC3 277 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 CADP27708 2225 aa16.71■□□□□ 0.27
HOXA9-202ENST00000396345 A0A1W2PPR1 153 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 FAM171A2A8MVW0 826 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 SURF4O15260 269 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 MPZL1O95297 269 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 GPANK1O95872 356 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 CELA3BP08861 270 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 CECR9P0C854 216 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 EPHA2P29317 976 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 SLC25A1P53007 311 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 PCBD1P61457 104 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 GLO1Q04760 184 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 UGT2A3Q6UWM9 527 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 ZNF704Q6ZNC4 412 aaPredicted RBP16.7■□□□□ 0.26
HOXA9-202ENST00000396345 ZBTB49Q6ZSB9 765 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 C11orf40Q8WZ69 217 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 OTULINQ96BN8 352 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 FBXO17Q96EF6 278 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 ZNF416Q9BWM5 594 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 GABARAPL3Q9BY60 117 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 NMNAT2Q9BZQ4 307 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 RIBC2Q9H4K1 309 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 TVP23BQ9NYZ1 205 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 FBXL3Q9UKT7 428 aa16.7■□□□□ 0.26
HOXA9-202ENST00000396345 ZAR1LA6NP61 321 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 C12orf71A8MTZ7 269 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 MMP7P09237 267 aaPredicted RBP16.69■□□□□ 0.26
HOXA9-202ENST00000396345 GAAP10253 952 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 ZNF32P17041 273 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 PAICSP22234 425 aaKnown RBP16.69■□□□□ 0.26
HOXA9-202ENST00000396345 PYCR1P32322 319 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 RAD23AP54725 363 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 SPOCK1Q08629 439 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 ENDOGQ14249 297 aaKnown RBP16.69■□□□□ 0.26
HOXA9-202ENST00000396345 RAB39AQ14964 217 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 SNAPC1Q16533 368 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 KCNMB1Q16558 191 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 ADAM5Q6NVV9 412 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 MYPOPQ86VE0 399 aaPredicted RBP16.69■□□□□ 0.26
HOXA9-202ENST00000396345 DEPDC4Q8N2C3 294 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 RADILQ96JH8 1075 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 ZNF75AQ96N20 296 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 SLC29A1Q99808 456 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 KCNS3Q9BQ31 491 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 PRRG3Q9BZD7 231 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 MED20Q9H944 212 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 ROS1P08922 2347 aa16.69■□□□□ 0.26
HOXA9-202ENST00000396345 FAM183AA6NL82 134 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 PRR23D1E9PI22 279 aaPredicted RBP16.68■□□□□ 0.26
HOXA9-202ENST00000396345 HLA-DQA2P01906 255 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 GYPBP06028 91 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 PRR23D2P0DMB1 279 aaPredicted RBP16.68■□□□□ 0.26
HOXA9-202ENST00000396345 ZNF14P17017 642 aaPredicted RBP16.68■□□□□ 0.26
HOXA9-202ENST00000396345 SPI1P17947 270 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 POLR2IP36954 125 aaKnown RBP16.68■□□□□ 0.26
HOXA9-202ENST00000396345 LSM6P62312 80 aaKnown RBP16.68■□□□□ 0.26
HOXA9-202ENST00000396345 NAAAQ02083 359 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 HSF2Q03933 536 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 PLP2Q04941 152 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 TRIP10Q15642 601 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 SLX4IPQ5VYV7 408 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 OTPQ5XKR4 325 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 SLC22A25Q6T423 547 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.68■□□□□ 0.26
HOXA9-202ENST00000396345 SYT9Q86SS6 491 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 KBTBD8Q8NFY9 601 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 OR10H5Q8NGA6 315 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 OR51L1Q8NGJ5 315 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 ZNRF4Q8WWF5 429 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 MS4A3Q96HJ5 214 aa16.68■□□□□ 0.26
HOXA9-202ENST00000396345 WACQ9BTA9 647 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms