RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TSPAN32Q96QS1 320 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 SHARPINQ9H0F6 387 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 DCAF13Q9NV06 445 aaKnown RBP11.81□□□□□ -0.52
CXCL12-205ENST00000395794 TMEM160Q9NX00 188 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 TAAR3PQ9P1P4 343 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 ADAM21Q9UKJ8 722 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 AURKCQ9UQB9 309 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 ARL2BPQ9Y2Y0 163 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 TIMM10BQ9Y5J6 103 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 AHCYL1O43865 530 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 DCTN3O75935 186 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 PRSS23O95084 383 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 CD14P08571 375 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 CST2P09228 141 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 NAT2P11245 290 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF32P17041 273 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 HNF1AP20823 631 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 FUT4P22083 530 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 LAP3P28838 519 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 SMIM11AP58511 58 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 MXRA7P84157 204 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 MAD2L1BPQ15013 274 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-205ENST00000395794 MSMPQ1L6U9 139 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 SAMD4BQ5PRF9 694 aaKnown RBP11.8□□□□□ -0.52
CXCL12-205ENST00000395794 ARL9Q6T311 187 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 C1orf174Q8IYL3 243 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 LRRC75AQ8NAA5 344 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 OR1J1Q8NGS3 322 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 SLC7A13Q8TCU3 470 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 RDH5Q92781 318 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 HPS1Q92902 700 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 NABP1Q96AH0 204 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 FAM46AQ96IP4 442 aaKnown RBP11.8□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF570Q96NI8 536 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 GORASP2Q9H8Y8 452 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 HINT3Q9NQE9 182 aaKnown RBP11.8□□□□□ -0.52
CXCL12-205ENST00000395794 NDE1Q9NXR1 346 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 NDUFAF4Q9P032 175 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 MAGEL2Q9UJ55 1249 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 CR1P17927 2039 aa11.8□□□□□ -0.52
CXCL12-205ENST00000395794 ALPK2Q86TB3 2170 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 IGKV1D-43A0A0B4J1Z2 117 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 C5orf49A4QMS7 147 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 CDC42EP2O14613 210 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 TPD52L2O43399 206 aaKnown RBP11.79□□□□□ -0.52
CXCL12-205ENST00000395794 NDUFB2O95178 105 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 TGFAP01135 160 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 FAM157CP0CG43 387 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF250P15622 560 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 MSR1P21757 451 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 GCH1P30793 250 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 PCGF3Q3KNV8 242 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 ALKBH6Q3KRA9 238 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 GPR139Q6DWJ6 353 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 C16orf89Q6UX73 402 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 SYT9Q86SS6 491 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 CLDN22Q8N7P3 220 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 FAM156AQ8NDB6 213 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 CPEB3Q8NE35 698 aaKnown RBP11.79□□□□□ -0.52
CXCL12-205ENST00000395794 AKR7LQ8NHP1 331 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 MSI2Q96DH6 328 aaKnown RBP11.79□□□□□ -0.52
CXCL12-205ENST00000395794 PYURFQ96I23 114 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 SNX18Q96RF0 628 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 WACQ9BTA9 647 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 OR2H1Q9GZK4 316 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 CHODLQ9H9P2 273 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 MYEF2Q9P2K5 600 aaKnown RBP11.79□□□□□ -0.52
CXCL12-205ENST00000395794 TAGLN3Q9UI15 199 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 ADAM18Q9Y3Q7 739 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 V9GYQ6 96 aa11.79□□□□□ -0.52
CXCL12-205ENST00000395794 LRP5LA4QPB2 252 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 LYNX1G3V0Z9 82 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 H7C1C5 153 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 CLPTM1O96005 669 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 HPXP02790 462 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 IGFBP1P08833 259 aaPredicted RBP11.78□□□□□ -0.52
CXCL12-205ENST00000395794 TACSTD2P09758 323 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 LYNX1P0DP58 116 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 HSD17B1P14061 328 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 ACHEP22303 614 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 GPR6P46095 362 aaPredicted RBP11.78□□□□□ -0.52
CXCL12-205ENST00000395794 MNAT1P51948 309 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 ARHGDIAP52565 204 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 LCN6P62502 163 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 MRPS11P82912 194 aaKnown RBP11.78□□□□□ -0.52
CXCL12-205ENST00000395794 PSG4Q00888 419 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 FHL1Q13642 323 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 RIN1Q13671 783 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF718Q3SXZ3 478 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 PGAM4Q8N0Y7 254 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 OR52J3Q8NH60 311 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 POM121L2Q96KW2 1035 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 Q96M85 177 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 NSMCE2Q96MF7 247 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 CDRT15Q96T59 188 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF416Q9BWM5 594 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 RERGLQ9H628 205 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 DECR2Q9NUI1 292 aa11.78□□□□□ -0.52
CXCL12-205ENST00000395794 NDRG4Q9ULP0 352 aaKnown RBP11.78□□□□□ -0.52
CXCL12-205ENST00000395794 ARFGEF3Q5TH69 2177 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms