RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C CDC31P06704 161 aaKnown RBP3.62□□□□□ -1.83
LCB4YOR171C AAD3P25612 363 aa3.62□□□□□ -1.83
LCB4YOR171C STO1P34160 861 aaKnown RBP3.62□□□□□ -1.83
LCB4YOR171C CAJ1P39101 391 aa3.62□□□□□ -1.83
LCB4YOR171C NIT1P40447 199 aa3.62□□□□□ -1.83
LCB4YOR171C YKR011CQ02209 353 aa3.62□□□□□ -1.83
LCB4YOR171C ROT1Q03691 256 aa3.62□□□□□ -1.83
LCB4YOR171C YDR514CQ04408 483 aa3.62□□□□□ -1.83
LCB4YOR171C SSL1Q04673 461 aaPredicted RBP3.62□□□□□ -1.83
LCB4YOR171C SGD1Q06132 899 aa3.62□□□□□ -1.83
LCB4YOR171C ADY3Q07732 790 aa3.62□□□□□ -1.83
LCB4YOR171C TPO1Q07824 586 aa3.62□□□□□ -1.83
LCB4YOR171C GLT1Q12680 2145 aaKnown RBP3.62□□□□□ -1.83
LCB4YOR171C RAD18P10862 487 aa3.62□□□□□ -1.83
LCB4YOR171C PGI1P12709 554 aaKnown RBP3.62□□□□□ -1.83
LCB4YOR171C SFP1P32432 683 aa3.62□□□□□ -1.83
LCB4YOR171C MAC1P35192 417 aa3.62□□□□□ -1.83
LCB4YOR171C NPR3P38742 1146 aa3.62□□□□□ -1.83
LCB4YOR171C CEP3P40969 608 aa3.62□□□□□ -1.83
LCB4YOR171C CAF16P43569 289 aa3.62□□□□□ -1.83
LCB4YOR171C GCV2P49095 1034 aa3.62□□□□□ -1.83
LCB4YOR171C ATP22P50273 684 aaPredicted RBP3.62□□□□□ -1.83
LCB4YOR171C MRPL22P53881 309 aa3.62□□□□□ -1.83
LCB4YOR171C UBX4P54730 416 aa3.62□□□□□ -1.83
LCB4YOR171C ERO1Q03103 563 aa3.62□□□□□ -1.83
LCB4YOR171C YDR132CQ03900 495 aa3.62□□□□□ -1.83
LCB4YOR171C TSR2Q06672 205 aaKnown RBP3.62□□□□□ -1.83
LCB4YOR171C YOL087CQ99247 1116 aa3.62□□□□□ -1.83
LCB4YOR171C SAC3P46674 1301 aa3.61□□□□□ -1.83
LCB4YOR171C CDC6P09119 513 aa3.61□□□□□ -1.83
LCB4YOR171C TPM1P17536 199 aaKnown RBP3.61□□□□□ -1.83
LCB4YOR171C PCL2P25693 308 aa3.61□□□□□ -1.83
LCB4YOR171C TYE7P33122 291 aaPredicted RBP3.61□□□□□ -1.83
LCB4YOR171C TSA1P34760 196 aaKnown RBP3.61□□□□□ -1.83
LCB4YOR171C LAM1P38851 1228 aa3.61□□□□□ -1.83
LCB4YOR171C RRP8P38961 392 aaKnown RBP3.61□□□□□ -1.83
LCB4YOR171C MAM1P40065 302 aa3.61□□□□□ -1.83
LCB4YOR171C SAP185P40856 1058 aa3.61□□□□□ -1.83
LCB4YOR171C GPP1P41277 250 aaKnown RBP3.61□□□□□ -1.83
LCB4YOR171C VTC2P43585 828 aa3.61□□□□□ -1.83
LCB4YOR171C BTN2P53286 410 aa3.61□□□□□ -1.83
LCB4YOR171C TGL2P54857 326 aa3.61□□□□□ -1.83
LCB4YOR171C VTC3Q02725 835 aa3.61□□□□□ -1.83
LCB4YOR171C SPC19Q03954 165 aa3.61□□□□□ -1.83
LCB4YOR171C DUS4Q06063 367 aa3.61□□□□□ -1.83
LCB4YOR171C WHI4Q07655 649 aaKnown RBP3.61□□□□□ -1.83
LCB4YOR171C ISA1Q07821 250 aaPredicted RBP3.61□□□□□ -1.83
LCB4YOR171C YPL191CQ08930 360 aa3.61□□□□□ -1.83
LCB4YOR171C YBR182C-AQ8TGU6 64 aa3.61□□□□□ -1.83
LCB4YOR171C RPS9AO13516 197 aaKnown RBP3.6□□□□□ -1.83
LCB4YOR171C FBP1P09201 348 aa3.6□□□□□ -1.83
LCB4YOR171C MIH1P23748 554 aa3.6□□□□□ -1.83
LCB4YOR171C CYS3P31373 394 aaKnown RBP3.6□□□□□ -1.83
LCB4YOR171C MRS6P32864 603 aaKnown RBP3.6□□□□□ -1.83
LCB4YOR171C YKL050CP35736 922 aa3.6□□□□□ -1.83
LCB4YOR171C ESL2P36168 1195 aa3.6□□□□□ -1.83
LCB4YOR171C EXO84P38261 753 aa3.6□□□□□ -1.83
LCB4YOR171C MEF2P39677 819 aa3.6□□□□□ -1.83
LCB4YOR171C MGS1P40151 587 aa3.6□□□□□ -1.83
LCB4YOR171C ECL1P48235 211 aa3.6□□□□□ -1.83
LCB4YOR171C PSP2P50109 593 aaKnown RBP3.6□□□□□ -1.83
LCB4YOR171C GTF1P53260 183 aaPredicted RBP3.6□□□□□ -1.83
LCB4YOR171C VPS30Q02948 557 aa3.6□□□□□ -1.83
LCB4YOR171C YDR338CQ05497 695 aa3.6□□□□□ -1.83
LCB4YOR171C RIX7Q07844 837 aaKnown RBP3.6□□□□□ -1.83
LCB4YOR171C HMI1Q12039 706 aa3.6□□□□□ -1.83
LCB4YOR171C CHD1P32657 1468 aa3.6□□□□□ -1.83
LCB4YOR171C YEL1P34225 687 aa3.6□□□□□ -1.83
LCB4YOR171C SEG2P34250 1132 aa3.6□□□□□ -1.83
LCB4YOR171C POA1P38218 177 aa3.6□□□□□ -1.83
LCB4YOR171C YIL108WP40483 696 aaKnown RBP3.6□□□□□ -1.83
LCB4YOR171C ALY2P47029 1046 aa3.6□□□□□ -1.83
LCB4YOR171C BNA1P47096 177 aa3.6□□□□□ -1.83
LCB4YOR171C MET13P53128 600 aa3.6□□□□□ -1.83
LCB4YOR171C SPC105P53148 917 aa3.6□□□□□ -1.83
LCB4YOR171C SNP1Q00916 300 aaPredicted RBP3.6□□□□□ -1.83
LCB4YOR171C GCN5Q03330 439 aa3.6□□□□□ -1.83
LCB4YOR171C YDR286CQ05530 114 aa3.6□□□□□ -1.83
LCB4YOR171C CDA2Q06703 312 aa3.6□□□□□ -1.83
LCB4YOR171C HAL9Q12180 1030 aa3.6□□□□□ -1.83
LCB4YOR171C YOR022CQ12204 715 aa3.6□□□□□ -1.83
LCB4YOR171C SST2P11972 698 aaKnown RBP3.59□□□□□ -1.83
LCB4YOR171C HMG1P12683 1054 aa3.59□□□□□ -1.83
LCB4YOR171C SFL1P20134 766 aa3.59□□□□□ -1.83
LCB4YOR171C EMC1P25574 760 aa3.59□□□□□ -1.83
LCB4YOR171C CDC60P26637 1090 aaKnown RBP3.59□□□□□ -1.83
LCB4YOR171C HOG1P32485 435 aa3.59□□□□□ -1.83
LCB4YOR171C PIM1P36775 1133 aa3.59□□□□□ -1.83
LCB4YOR171C SET5P38890 526 aaKnown RBP3.59□□□□□ -1.83
LCB4YOR171C CCT3P39077 534 aaKnown RBP3.59□□□□□ -1.83
LCB4YOR171C ESL1P40456 1118 aa3.59□□□□□ -1.83
LCB4YOR171C RLP7P40693 322 aaKnown RBP3.59□□□□□ -1.83
LCB4YOR171C MET12P46151 657 aa3.59□□□□□ -1.83
LCB4YOR171C HLJ1P48353 224 aa3.59□□□□□ -1.83
LCB4YOR171C YGR237CP50089 785 aa3.59□□□□□ -1.83
LCB4YOR171C AIM14P53109 570 aa3.59□□□□□ -1.83
LCB4YOR171C GPG1P53130 126 aa3.59□□□□□ -1.83
LCB4YOR171C VPS62P53285 467 aa3.59□□□□□ -1.83
LCB4YOR171C SDA1P53313 767 aaKnown RBP3.59□□□□□ -1.83
LCB4YOR171C RIA1P53893 1110 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms