RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C ILM1P47155 203 aa5.62□□□□□ -1.51
RAT1YOR048C MCM6P53091 1017 aaKnown RBP5.62□□□□□ -1.51
RAT1YOR048C YGR125WP53273 1036 aa5.62□□□□□ -1.51
RAT1YOR048C LSB1P53281 241 aa5.62□□□□□ -1.51
RAT1YOR048C VPS16Q03308 798 aa5.62□□□□□ -1.51
RAT1YOR048C YBL055CP34220 418 aaPredicted RBP5.61□□□□□ -1.51
RAT1YOR048C USE1P53146 245 aa5.61□□□□□ -1.51
RAT1YOR048C BIO4P53630 237 aa5.61□□□□□ -1.51
RAT1YOR048C PEX29Q03370 554 aa5.61□□□□□ -1.51
RAT1YOR048C SHE9Q04172 456 aa5.61□□□□□ -1.51
RAT1YOR048C FIG2P25653 1609 aa5.61□□□□□ -1.51
RAT1YOR048C TIF1P10081 395 aaKnown RBP5.61□□□□□ -1.51
RAT1YOR048C ADH4P10127 382 aa5.61□□□□□ -1.51
RAT1YOR048C AEP2P22136 580 aa5.61□□□□□ -1.51
RAT1YOR048C SEC20P28791 383 aa5.61□□□□□ -1.51
RAT1YOR048C MCM5P29496 775 aaKnown RBP5.61□□□□□ -1.51
RAT1YOR048C HXT3P32466 567 aaKnown RBP5.61□□□□□ -1.51
RAT1YOR048C MUD1P32605 298 aaKnown RBP5.61□□□□□ -1.51
RAT1YOR048C CCL1P37366 393 aa5.61□□□□□ -1.51
RAT1YOR048C DUG2P38149 878 aa5.61□□□□□ -1.51
RAT1YOR048C YMR134WP40207 237 aa5.61□□□□□ -1.51
RAT1YOR048C VPS70P47161 811 aa5.61□□□□□ -1.51
RAT1YOR048C SGM1P47166 707 aa5.61□□□□□ -1.51
RAT1YOR048C TAM41P53230 385 aa5.61□□□□□ -1.51
RAT1YOR048C DRN1P53255 507 aaKnown RBP5.61□□□□□ -1.51
RAT1YOR048C TRM44Q02648 567 aaKnown RBP5.61□□□□□ -1.51
RAT1YOR048C PPM1Q04081 328 aa5.61□□□□□ -1.51
RAT1YOR048C SPC24Q04477 213 aa5.61□□□□□ -1.51
RAT1YOR048C YDR222WQ04925 415 aa5.61□□□□□ -1.51
RAT1YOR048C ENO2P00925 437 aaKnown RBP5.61□□□□□ -1.51
RAT1YOR048C GCR1P07261 785 aa5.61□□□□□ -1.51
RAT1YOR048C HEM15P16622 393 aa5.61□□□□□ -1.51
RAT1YOR048C TFC4P33339 1025 aa5.61□□□□□ -1.51
RAT1YOR048C BDF1P35817 686 aa5.61□□□□□ -1.51
RAT1YOR048C YGR016WP53209 190 aa5.61□□□□□ -1.51
RAT1YOR048C NMA111P53920 997 aa5.61□□□□□ -1.51
RAT1YOR048C SFB2P53953 876 aa5.61□□□□□ -1.51
RAT1YOR048C PTA1Q01329 785 aaPredicted RBP5.61□□□□□ -1.51
RAT1YOR048C YDR090CQ03193 310 aa5.61□□□□□ -1.51
RAT1YOR048C YET2Q04210 160 aa5.61□□□□□ -1.51
RAT1YOR048C TAF10Q12030 206 aa5.61□□□□□ -1.51
RAT1YOR048C RRG1Q12167 365 aaPredicted RBP5.61□□□□□ -1.51
RAT1YOR048C YDL206WQ12424 762 aa5.61□□□□□ -1.51
RAT1YOR048C ILV2P07342 687 aaKnown RBP5.6□□□□□ -1.51
RAT1YOR048C CDC24P11433 854 aaPredicted RBP5.6□□□□□ -1.51
RAT1YOR048C CDC10P25342 322 aaKnown RBP5.6□□□□□ -1.51
RAT1YOR048C CST26P38226 397 aa5.6□□□□□ -1.51
RAT1YOR048C TRM5P38793 499 aa5.6□□□□□ -1.51
RAT1YOR048C UBP2Q01476 1272 aa5.6□□□□□ -1.51
RAT1YOR048C OSH6Q02201 448 aa5.6□□□□□ -1.51
RAT1YOR048C CDC53Q12018 815 aaKnown RBP5.6□□□□□ -1.51
RAT1YOR048C HKR1P41809 1802 aa5.6□□□□□ -1.51
RAT1YOR048C SRD1P09007 221 aa5.6□□□□□ -1.51
RAT1YOR048C SMF2P38778 549 aa5.6□□□□□ -1.51
RAT1YOR048C NUP82P40368 713 aa5.6□□□□□ -1.51
RAT1YOR048C HXT8P40886 569 aa5.6□□□□□ -1.51
RAT1YOR048C GPD2P41911 440 aaKnown RBP5.6□□□□□ -1.51
RAT1YOR048C SBE2P42223 864 aaKnown RBP5.6□□□□□ -1.51
RAT1YOR048C VTC4P47075 721 aa5.6□□□□□ -1.51
RAT1YOR048C CPR7P47103 393 aa5.6□□□□□ -1.51
RAT1YOR048C ACL4Q03771 387 aa5.6□□□□□ -1.51
RAT1YOR048C TSR1Q07381 788 aaKnown RBP5.6□□□□□ -1.51
RAT1YOR048C YLR053CQ12026 108 aa5.6□□□□□ -1.51
RAT1YOR048C DBP5P20449 482 aaKnown RBP5.59□□□□□ -1.51
RAT1YOR048C CLB4P24871 460 aa5.59□□□□□ -1.51
RAT1YOR048C RRT12P25381 491 aa5.59□□□□□ -1.51
RAT1YOR048C KIP1P28742 1111 aa5.59□□□□□ -1.51
RAT1YOR048C RAD5P32849 1169 aaPredicted RBP5.59□□□□□ -1.51
RAT1YOR048C TDA11P38854 504 aa5.59□□□□□ -1.51
RAT1YOR048C KHA1P40309 873 aa5.59□□□□□ -1.51
RAT1YOR048C SEC27P41811 889 aaKnown RBP5.59□□□□□ -1.51
RAT1YOR048C CNM67P53865 581 aaKnown RBP5.59□□□□□ -1.51
RAT1YOR048C YLR326WQ06170 240 aaKnown RBP5.59□□□□□ -1.51
RAT1YOR048C RIO1Q12196 484 aaKnown RBP5.59□□□□□ -1.51
RAT1YOR048C TEF1P02994 458 aaKnown RBP5.59□□□□□ -1.51
RAT1YOR048C URE2P23202 354 aaKnown RBP5.59□□□□□ -1.51
RAT1YOR048C SPS22P25380 463 aa5.59□□□□□ -1.51
RAT1YOR048C YME1P32795 747 aa5.59□□□□□ -1.51
RAT1YOR048C PIN4P34217 668 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
RAT1YOR048C PFF1P38244 976 aa5.59□□□□□ -1.51
RAT1YOR048C PHO88P38264 188 aaPredicted RBP5.59□□□□□ -1.51
RAT1YOR048C RFC3P38629 340 aa5.59□□□□□ -1.51
RAT1YOR048C YHL008CP38750 627 aa5.59□□□□□ -1.51
RAT1YOR048C LIN1P38852 340 aaPredicted RBP5.59□□□□□ -1.51
RAT1YOR048C TMN3P40071 706 aa5.59□□□□□ -1.51
RAT1YOR048C YFL012WP43580 148 aa5.59□□□□□ -1.51
RAT1YOR048C KIN4Q01919 800 aa5.59□□□□□ -1.51
RAT1YOR048C SYH1Q02875 849 aaKnown RBP5.59□□□□□ -1.51
RAT1YOR048C DUS3Q06053 668 aaKnown RBP5.59□□□□□ -1.51
RAT1YOR048C VPS13Q07878 3144 aa5.59□□□□□ -1.52
RAT1YOR048C FBP1P09201 348 aa5.58□□□□□ -1.52
RAT1YOR048C SSC1P0CS90 654 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C SBP1P10080 294 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C KIN1P13185 1064 aa5.58□□□□□ -1.52
RAT1YOR048C SQT1P35184 431 aa5.58□□□□□ -1.52
RAT1YOR048C PDX3P38075 228 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C ZAP1P47043 880 aa5.58□□□□□ -1.52
RAT1YOR048C ORC5P50874 479 aa5.58□□□□□ -1.52
RAT1YOR048C YML6P51998 286 aa5.58□□□□□ -1.52
RAT1YOR048C YGR111WP53265 400 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 140.2 ms