RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A SSL2Q00578 843 aa4.68□□□□□ -1.66
EFG1YGR271C-A GAD1Q04792 585 aa4.68□□□□□ -1.66
EFG1YGR271C-A CDC53Q12018 815 aaKnown RBP4.68□□□□□ -1.66
EFG1YGR271C-A ILV6P25605 309 aaKnown RBP4.67□□□□□ -1.66
EFG1YGR271C-A LYS9P38999 446 aa4.67□□□□□ -1.66
EFG1YGR271C-A CHZ1P40019 153 aaPredicted RBP4.67□□□□□ -1.66
EFG1YGR271C-A CCT7P42943 550 aaKnown RBP4.67□□□□□ -1.66
EFG1YGR271C-A BNA2P47125 453 aa4.67□□□□□ -1.66
EFG1YGR271C-A ARG5,6Q01217 863 aa4.67□□□□□ -1.66
EFG1YGR271C-A HMO1Q03973 246 aaKnown RBP4.67□□□□□ -1.66
EFG1YGR271C-A MDM12Q92328 271 aa4.67□□□□□ -1.66
EFG1YGR271C-A YLR149CQ99296 730 aa4.67□□□□□ -1.66
EFG1YGR271C-A ADE2P21264 571 aaKnown RBP4.66□□□□□ -1.66
EFG1YGR271C-A GID8P40208 455 aa4.66□□□□□ -1.66
EFG1YGR271C-A PRP31P49704 494 aaPredicted RBP4.66□□□□□ -1.66
EFG1YGR271C-A RPN4Q03465 531 aa4.66□□□□□ -1.66
EFG1YGR271C-A MCM21Q06675 368 aa4.66□□□□□ -1.66
EFG1YGR271C-A BNR1P40450 1375 aa4.65□□□□□ -1.66
EFG1YGR271C-A PYC1P11154 1178 aaKnown RBP4.65□□□□□ -1.67
EFG1YGR271C-A HCA4P20448 770 aaKnown RBP4.65□□□□□ -1.67
EFG1YGR271C-A KIN3P22209 435 aa4.65□□□□□ -1.67
EFG1YGR271C-A HIS7P33734 552 aaKnown RBP4.65□□□□□ -1.67
EFG1YGR271C-A YHR112CP38716 378 aa4.65□□□□□ -1.67
EFG1YGR271C-A MIP6P38760 659 aaKnown RBP4.65□□□□□ -1.67
EFG1YGR271C-A YIL166CP40445 542 aa4.65□□□□□ -1.67
EFG1YGR271C-A YOL098CQ12496 1037 aa4.65□□□□□ -1.67
EFG1YGR271C-A YKL033W-AQ86ZR7 236 aa4.65□□□□□ -1.67
EFG1YGR271C-A ERR1P0CX10 437 aa4.64□□□□□ -1.67
EFG1YGR271C-A ERR2P0CX11 437 aa4.64□□□□□ -1.67
EFG1YGR271C-A CDC43P18898 376 aa4.64□□□□□ -1.67
EFG1YGR271C-A MIH1P23748 554 aa4.64□□□□□ -1.67
EFG1YGR271C-A UBS1P38290 277 aa4.64□□□□□ -1.67
EFG1YGR271C-A FMO1P38866 432 aa4.64□□□□□ -1.67
EFG1YGR271C-A CAF16P43569 289 aa4.64□□□□□ -1.67
EFG1YGR271C-A YBP2P53169 641 aa4.64□□□□□ -1.67
EFG1YGR271C-A MTL1P53214 551 aa4.64□□□□□ -1.67
EFG1YGR271C-A FHN1P53279 174 aa4.64□□□□□ -1.67
EFG1YGR271C-A LGE1Q02796 332 aaKnown RBP4.64□□□□□ -1.67
EFG1YGR271C-A TUB1P09733 447 aaKnown RBP4.63□□□□□ -1.67
EFG1YGR271C-A DMC1P25453 334 aa4.63□□□□□ -1.67
EFG1YGR271C-A ADY2P25613 283 aa4.63□□□□□ -1.67
EFG1YGR271C-A FLO10P36170 1169 aa4.63□□□□□ -1.67
EFG1YGR271C-A OCA5P38738 679 aa4.63□□□□□ -1.67
EFG1YGR271C-A REV7P38927 245 aa4.63□□□□□ -1.67
EFG1YGR271C-A NDC80P40460 691 aa4.63□□□□□ -1.67
EFG1YGR271C-A BUD6P41697 788 aa4.63□□□□□ -1.67
EFG1YGR271C-A IMO32P53219 342 aa4.63□□□□□ -1.67
EFG1YGR271C-A SNP1Q00916 300 aaPredicted RBP4.63□□□□□ -1.67
EFG1YGR271C-A COQ11Q05892 277 aa4.63□□□□□ -1.67
EFG1YGR271C-A AIM44Q99299 758 aa4.63□□□□□ -1.67
EFG1YGR271C-A HRP1Q99383 534 aaKnown RBP4.63□□□□□ -1.67
EFG1YGR271C-A MET6P05694 767 aaKnown RBP4.62□□□□□ -1.67
EFG1YGR271C-A STO1P34160 861 aaKnown RBP4.62□□□□□ -1.67
EFG1YGR271C-A TRZ1P36159 838 aaPredicted RBP4.62□□□□□ -1.67
EFG1YGR271C-A HRB1P38922 454 aaKnown RBP RIP-Chip data4.62□□□□□ -1.67not detected
EFG1YGR271C-A YJL206CP39529 758 aa4.62□□□□□ -1.67
EFG1YGR271C-A NUP60P39705 539 aa4.62□□□□□ -1.67
EFG1YGR271C-A PAN2P53010 1115 aaPredicted RBP4.62□□□□□ -1.67
EFG1YGR271C-A ARO10Q06408 635 aa4.62□□□□□ -1.67
EFG1YGR271C-A CDC9P04819 755 aa4.61□□□□□ -1.67
EFG1YGR271C-A CBR1P38626 284 aaKnown RBP4.61□□□□□ -1.67
EFG1YGR271C-A RIX1P38883 763 aaPredicted RBP4.61□□□□□ -1.67
EFG1YGR271C-A BDH2P39713 417 aa4.61□□□□□ -1.67
EFG1YGR271C-A CTK1Q03957 528 aaKnown RBP4.61□□□□□ -1.67
EFG1YGR271C-A TIM23P32897 222 aa4.6□□□□□ -1.67
EFG1YGR271C-A PPZ2P33329 710 aa4.6□□□□□ -1.67
EFG1YGR271C-A YKR018CP36114 725 aa4.6□□□□□ -1.67
EFG1YGR271C-A APT2P36973 181 aa4.6□□□□□ -1.67
EFG1YGR271C-A PBP2P38151 413 aaKnown RBP RIP-Chip data4.6□□□□□ -1.67not detected
EFG1YGR271C-A ARG2P40360 574 aa4.6□□□□□ -1.67
EFG1YGR271C-A RGC1Q06108 1083 aaKnown RBP4.6□□□□□ -1.67
EFG1YGR271C-A YOR131CQ12486 218 aa4.6□□□□□ -1.67
EFG1YGR271C-A MEF1P25039 761 aa4.59□□□□□ -1.67
EFG1YGR271C-A ERG6P25087 383 aaKnown RBP4.59□□□□□ -1.67
EFG1YGR271C-A EMP70P32802 667 aa4.59□□□□□ -1.67
EFG1YGR271C-A GET2P40056 285 aa4.59□□□□□ -1.67
EFG1YGR271C-A ORC4P54791 529 aa4.59□□□□□ -1.67
EFG1YGR271C-A Q0142Q9ZZW4 58 aa4.59□□□□□ -1.67
EFG1YGR271C-A MVD1P32377 396 aaKnown RBP4.58□□□□□ -1.68
EFG1YGR271C-A PHO11P35842 467 aa4.58□□□□□ -1.68
EFG1YGR271C-A YKR051WP36142 418 aa4.58□□□□□ -1.68
EFG1YGR271C-A PHO12P38693 467 aa4.58□□□□□ -1.68
EFG1YGR271C-A SFB3P38810 929 aa4.58□□□□□ -1.68
EFG1YGR271C-A YFL052WP43551 465 aa4.58□□□□□ -1.68
EFG1YGR271C-A PCL10P53124 433 aa4.58□□□□□ -1.68
EFG1YGR271C-A ATG4P53867 494 aa4.58□□□□□ -1.68
EFG1YGR271C-A MLH3Q12083 715 aa4.58□□□□□ -1.68
EFG1YGR271C-A CLF1Q12309 687 aaPredicted RBP4.58□□□□□ -1.68
EFG1YGR271C-A YNL162W-AQ3E7A8 72 aa4.58□□□□□ -1.68
EFG1YGR271C-A THR1P17423 357 aaKnown RBP4.57□□□□□ -1.68
EFG1YGR271C-A HOG1P32485 435 aa4.57□□□□□ -1.68
EFG1YGR271C-A SEC6P32844 805 aa4.57□□□□□ -1.68
EFG1YGR271C-A RPN10P38886 268 aaKnown RBP4.57□□□□□ -1.68
EFG1YGR271C-A YEL020CP39994 560 aa4.57□□□□□ -1.68
EFG1YGR271C-A NPY1P53164 384 aa4.57□□□□□ -1.68
EFG1YGR271C-A APM1Q00776 475 aaPredicted RBP4.57□□□□□ -1.68
EFG1YGR271C-A REC102Q02721 264 aa4.57□□□□□ -1.68
EFG1YGR271C-A RPN13O13563 156 aa4.56□□□□□ -1.68
EFG1YGR271C-A SRD1P09007 221 aa4.56□□□□□ -1.68
EFG1YGR271C-A RNR1P21524 888 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 91.4 ms