RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 TPTE2Q6XPS3 522 aa21.42■■□□□ 1.02
PHGDH-232ENST00000641947 ANKRD31Q8N7Z5 1873 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 MYO5AQ9Y4I1 1855 aaKnown RBP21.41■■□□□ 1.02
PHGDH-232ENST00000641947 TM4SF1P30408 202 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 EVI5LQ96CN4 794 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 XAGE2Q96GT9 111 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 USP26Q9BXU7 913 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 TFCP2L1Q9NZI6 479 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 NRXN2Q9P2S2 1712 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 ATP2B3Q16720 1220 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 COL23A1Q86Y22 540 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-232ENST00000641947 HELBQ8NG08 1087 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-232ENST00000641947 KIF2CQ99661 725 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 AKAP2Q9Y2D5 859 aa21.41■■□□□ 1.02
PHGDH-232ENST00000641947 QSER1Q2KHR3 1735 aa21.4■■□□□ 1.02
PHGDH-232ENST00000641947 PDE8BO95263 885 aa21.4■■□□□ 1.02
PHGDH-232ENST00000641947 DDR1Q08345 913 aa21.4■■□□□ 1.02
PHGDH-232ENST00000641947 HAUS7Q99871 368 aa21.4■■□□□ 1.02
PHGDH-232ENST00000641947 MYH7P12883 1935 aa21.4■■□□□ 1.02
PHGDH-232ENST00000641947 MROH5Q6ZUA9 1318 aa21.39■■□□□ 1.02
PHGDH-232ENST00000641947 EZH2Q15910 746 aaKnown RBP21.39■■□□□ 1.01
PHGDH-232ENST00000641947 PRR5LQ6MZQ0 368 aa21.39■■□□□ 1.01
PHGDH-232ENST00000641947 CAMKK2Q96RR4 588 aa21.39■■□□□ 1.01
PHGDH-232ENST00000641947 SNAP23O00161 211 aa21.38■■□□□ 1.01
PHGDH-232ENST00000641947 EN1Q05925 392 aaPredicted RBP21.38■■□□□ 1.01
PHGDH-232ENST00000641947 CELF1Q92879 486 aaKnown RBP21.38■■□□□ 1.01
PHGDH-232ENST00000641947 MPHOSPH8Q99549 860 aa21.38■■□□□ 1.01
PHGDH-232ENST00000641947 PNPLA7Q6ZV29 1317 aa21.38■■□□□ 1.01
PHGDH-232ENST00000641947 TAF5LO75529 589 aa21.38■■□□□ 1.01
PHGDH-232ENST00000641947 FGFR2P21802 821 aa21.38■■□□□ 1.01
PHGDH-232ENST00000641947 IGHMBP2P38935 993 aaKnown RBP21.38■■□□□ 1.01
PHGDH-232ENST00000641947 CNBD1Q8NA66 436 aa21.38■■□□□ 1.01
PHGDH-232ENST00000641947 NLRP3Q96P20 1036 aa21.38■■□□□ 1.01
PHGDH-232ENST00000641947 DNAJC2Q99543 621 aaKnown RBP21.38■■□□□ 1.01
PHGDH-232ENST00000641947 ANO8Q9HCE9 1232 aaPredicted RBP21.38■■□□□ 1.01
PHGDH-232ENST00000641947 SGSM2O43147 1006 aa21.36■■□□□ 1.01
PHGDH-232ENST00000641947 DDRGK1Q96HY6 314 aa21.36■■□□□ 1.01
PHGDH-232ENST00000641947 CDC5LQ99459 802 aaKnown RBP21.36■■□□□ 1.01
PHGDH-232ENST00000641947 POLRMTO00411 1230 aaKnown RBP21.36■■□□□ 1.01
PHGDH-232ENST00000641947 REC8O95072 547 aa21.36■■□□□ 1.01
PHGDH-232ENST00000641947 CHGBP05060 677 aa21.36■■□□□ 1.01
PHGDH-232ENST00000641947 SERPINB2P05120 415 aa21.36■■□□□ 1.01
PHGDH-232ENST00000641947 SCARF1Q14162 830 aa21.36■■□□□ 1.01
PHGDH-232ENST00000641947 CWC27Q6UX04 472 aaKnown RBP21.36■■□□□ 1.01
PHGDH-232ENST00000641947 DDX46Q7L014 1031 aaKnown RBP21.36■■□□□ 1.01
PHGDH-232ENST00000641947 HMGB2P26583 209 aaKnown RBP21.35■■□□□ 1.01
PHGDH-232ENST00000641947 SLC4A3P48751 1232 aa21.35■■□□□ 1.01
PHGDH-232ENST00000641947 CHRNDQ07001 517 aa21.35■■□□□ 1.01
PHGDH-232ENST00000641947 PUM3Q15397 648 aaKnown RBP21.35■■□□□ 1.01
PHGDH-232ENST00000641947 ANKRD18AQ8IVF6 992 aa21.35■■□□□ 1.01
PHGDH-232ENST00000641947 FSD1Q9BTV5 496 aa21.35■■□□□ 1.01
PHGDH-232ENST00000641947 IFIT1P09914 478 aaKnown RBP21.34■■□□□ 1.01
PHGDH-232ENST00000641947 FAM227BQ96M60 508 aa21.34■■□□□ 1.01
PHGDH-232ENST00000641947 DIAPH3Q9NSV4 1193 aa21.34■■□□□ 1.01
PHGDH-232ENST00000641947 NPHP1O15259 732 aa21.33■■□□□ 1.01
PHGDH-232ENST00000641947 NMIQ13287 307 aaPredicted RBP21.33■■□□□ 1.01
PHGDH-232ENST00000641947 SLC51AQ86UW1 340 aa21.33■■□□□ 1.01
PHGDH-232ENST00000641947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.33■■□□□ 1.01
PHGDH-232ENST00000641947 A0A0D9SFI3 127 aa21.33■■□□□ 1
PHGDH-232ENST00000641947 WTIPA6NIX2 430 aaPredicted RBP21.33■■□□□ 1
PHGDH-232ENST00000641947 GOLIM4O00461 696 aa21.33■■□□□ 1
PHGDH-232ENST00000641947 EIF5BO60841 1220 aaKnown RBP21.33■■□□□ 1
PHGDH-232ENST00000641947 TTC39AQ5SRH9 613 aa21.33■■□□□ 1
PHGDH-232ENST00000641947 PI16Q6UXB8 463 aa21.33■■□□□ 1
PHGDH-232ENST00000641947 ANTXR1Q9H6X2 564 aa21.33■■□□□ 1
PHGDH-232ENST00000641947 ANO2Q9NQ90 1003 aa21.33■■□□□ 1
PHGDH-232ENST00000641947 BSDC1Q9NW68 430 aaPredicted RBP21.33■■□□□ 1
PHGDH-232ENST00000641947 PAG1Q9NWQ8 432 aa21.33■■□□□ 1
PHGDH-232ENST00000641947 CCDC158Q5M9N0 1113 aa21.32■■□□□ 1
PHGDH-232ENST00000641947 GORABQ5T7V8 394 aa21.32■■□□□ 1
PHGDH-232ENST00000641947 LPIN2Q92539 896 aa21.32■■□□□ 1
PHGDH-232ENST00000641947 DOCK2Q92608 1830 aa21.32■■□□□ 1
PHGDH-232ENST00000641947 COL11A2P13942 1736 aaPredicted RBP21.32■■□□□ 1
PHGDH-232ENST00000641947 RFX7Q2KHR2 1363 aa21.31■■□□□ 1
PHGDH-232ENST00000641947 PHKA1P46020 1223 aa21.31■■□□□ 1
PHGDH-232ENST00000641947 LSG1Q9H089 658 aaKnown RBP21.31■■□□□ 1
PHGDH-232ENST00000641947 SNRKQ9NRH2 765 aa21.31■■□□□ 1
PHGDH-232ENST00000641947 MINPP1Q9UNW1 487 aa21.31■■□□□ 1
PHGDH-232ENST00000641947 MCAMP43121 646 aa21.31■■□□□ 1
PHGDH-232ENST00000641947 DEFB132Q7Z7B7 95 aa21.31■■□□□ 1
PHGDH-232ENST00000641947 KBTBD3Q8NAB2 608 aa21.31■■□□□ 1
PHGDH-232ENST00000641947 RPS8P62241 208 aaKnown RBP21.3■■□□□ 1
PHGDH-232ENST00000641947 CCDC102BQ68D86 513 aa21.3■■□□□ 1
PHGDH-232ENST00000641947 MED23Q9ULK4 1368 aa21.29■■□□□ 1
PHGDH-232ENST00000641947 SLFNL1Q499Z3 407 aa21.29■■□□□ 1
PHGDH-232ENST00000641947 FLAD1Q8NFF5 587 aa21.29■■□□□ 1
PHGDH-232ENST00000641947 PALD1Q9ULE6 856 aa21.29■■□□□ 1
PHGDH-232ENST00000641947 MYH13Q9UKX3 1938 aa21.29■■□□□ 1
PHGDH-232ENST00000641947 SLC5A1P13866 664 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 ZAP70P43403 619 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 ST5P78524 1137 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 SLC15A2Q16348 729 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 CRY2Q49AN0 593 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 ZNF512BQ96KM6 892 aaPredicted RBP21.28■■□□□ 1
PHGDH-232ENST00000641947 RAD50Q92878 1312 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 HIP1O00291 1037 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 ARID4AP29374 1257 aaPredicted RBP21.28■■□□□ 1
PHGDH-232ENST00000641947 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
PHGDH-232ENST00000641947 PTH1RQ03431 593 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 MSL1Q68DK7 614 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms