RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 B4GALNT3Q6L9W6 998 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 KIF1BPQ96EK5 621 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 ZNF594Q96JF6 807 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-218ENST00000641491 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 CEP126Q9P2H0 1117 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 NRXN2Q9P2S2 1712 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 PA2G4Q9UQ80 394 aaKnown RBP15.98■□□□□ 0.15
PHGDH-218ENST00000641491 A0A0G2JLW4 131 aa15.97■□□□□ 0.15
PHGDH-218ENST00000641491 KIF3CO14782 793 aa15.97■□□□□ 0.15
PHGDH-218ENST00000641491 HOXA10P31260 410 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-218ENST00000641491 APLP1P51693 650 aa15.97■□□□□ 0.15
PHGDH-218ENST00000641491 KLHDC4Q8TBB5 520 aa15.97■□□□□ 0.15
PHGDH-218ENST00000641491 LRRCC1Q9C099 1032 aa15.97■□□□□ 0.15
PHGDH-218ENST00000641491 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-218ENST00000641491 AKAP2Q9Y2D5 859 aa15.97■□□□□ 0.15
PHGDH-218ENST00000641491 DDX60Q8IY21 1712 aaKnown RBP15.97■□□□□ 0.15
PHGDH-218ENST00000641491 PTPN12Q05209 780 aaKnown RBP15.96■□□□□ 0.15
PHGDH-218ENST00000641491 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
PHGDH-218ENST00000641491 CLASRPQ8N2M8 674 aaKnown RBP15.96■□□□□ 0.15
PHGDH-218ENST00000641491 CELF1Q92879 486 aaKnown RBP15.96■□□□□ 0.15
PHGDH-218ENST00000641491 GPATCH3Q96I76 525 aa15.96■□□□□ 0.15
PHGDH-218ENST00000641491 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-218ENST00000641491 GORABQ5T7V8 394 aa15.95■□□□□ 0.14
PHGDH-218ENST00000641491 ANKRD45Q5TZF3 282 aa15.95■□□□□ 0.14
PHGDH-218ENST00000641491 DNAJC5GQ8N7S2 189 aa15.95■□□□□ 0.14
PHGDH-218ENST00000641491 DCTPP1Q9H773 170 aa15.95■□□□□ 0.14
PHGDH-218ENST00000641491 MYH3P11055 1940 aa15.95■□□□□ 0.14
PHGDH-218ENST00000641491 TNRC6CQ9HCJ0 1690 aaKnown RBP15.95■□□□□ 0.14
PHGDH-218ENST00000641491 G3V3G9 751 aa15.94■□□□□ 0.14
PHGDH-218ENST00000641491 IFIT2P09913 472 aaKnown RBP15.94■□□□□ 0.14
PHGDH-218ENST00000641491 RFX5P48382 616 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-218ENST00000641491 GRIPAP1Q4V328 841 aa15.94■□□□□ 0.14
PHGDH-218ENST00000641491 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
PHGDH-218ENST00000641491 CC2D2BQ6DHV5 1058 aa15.94■□□□□ 0.14
PHGDH-218ENST00000641491 SIRT2Q8IXJ6 389 aa15.94■□□□□ 0.14
PHGDH-218ENST00000641491 BCS1LQ9Y276 419 aa15.94■□□□□ 0.14
PHGDH-218ENST00000641491 NOP58Q9Y2X3 529 aaKnown RBP15.94■□□□□ 0.14
PHGDH-218ENST00000641491 IFIT1P09914 478 aaKnown RBP15.93■□□□□ 0.14
PHGDH-218ENST00000641491 SLC5A1P13866 664 aa15.93■□□□□ 0.14
PHGDH-218ENST00000641491 CCDC93Q567U6 631 aa15.93■□□□□ 0.14
PHGDH-218ENST00000641491 DPP8Q6V1X1 898 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-218ENST00000641491 VPS37DQ86XT2 251 aa15.93■□□□□ 0.14
PHGDH-218ENST00000641491 XDHP47989 1333 aa15.93■□□□□ 0.14
PHGDH-218ENST00000641491 CHRNDQ07001 517 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 PUM3Q15397 648 aaKnown RBP15.92■□□□□ 0.14
PHGDH-218ENST00000641491 LRRC24Q50LG9 513 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 SP8Q8IXZ3 490 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 SUPT20HQ8NEM7 779 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 RHPN1Q8TCX5 695 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 NEUROD6Q96NK8 337 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 EYA3Q99504 573 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 GGA1Q9UJY5 639 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 WWC3Q9ULE0 1092 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 NSFL1CQ9UNZ2 370 aaKnown RBP15.92■□□□□ 0.14
PHGDH-218ENST00000641491 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
PHGDH-218ENST00000641491 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
PHGDH-218ENST00000641491 UFL1O94874 794 aa15.91■□□□□ 0.14
PHGDH-218ENST00000641491 IGHDP01880 384 aa15.91■□□□□ 0.14
PHGDH-218ENST00000641491 TFCP2Q12800 502 aa15.91■□□□□ 0.14
PHGDH-218ENST00000641491 ATP2B3Q16720 1220 aa15.91■□□□□ 0.14
PHGDH-218ENST00000641491 RTKN2Q8IZC4 609 aa15.91■□□□□ 0.14
PHGDH-218ENST00000641491 MPNDQ8N594 471 aa15.91■□□□□ 0.14
PHGDH-218ENST00000641491 PUS3Q9BZE2 481 aaKnown RBP15.91■□□□□ 0.14
PHGDH-218ENST00000641491 MINPP1Q9UNW1 487 aa15.91■□□□□ 0.14
PHGDH-218ENST00000641491 C21orf2O43822 256 aa15.9■□□□□ 0.14
PHGDH-218ENST00000641491 TOMM70O94826 608 aa15.9■□□□□ 0.14
PHGDH-218ENST00000641491 ATP2B4P23634 1241 aa15.9■□□□□ 0.14
PHGDH-218ENST00000641491 CAVIN4Q5BKX8 364 aa15.9■□□□□ 0.14
PHGDH-218ENST00000641491 AACSQ86V21 672 aa15.9■□□□□ 0.14
PHGDH-218ENST00000641491 IL1RAPL2Q9NP60 686 aa15.9■□□□□ 0.14
PHGDH-218ENST00000641491 LEMD3Q9Y2U8 911 aa15.9■□□□□ 0.14
PHGDH-218ENST00000641491 FRAT2O75474 233 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-218ENST00000641491 PDE8BO95263 885 aa15.89■□□□□ 0.13
PHGDH-218ENST00000641491 CHD1LQ86WJ1 897 aa15.89■□□□□ 0.13
PHGDH-218ENST00000641491 SMC5Q8IY18 1101 aa15.89■□□□□ 0.13
PHGDH-218ENST00000641491 HELBQ8NG08 1087 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-218ENST00000641491 LPIN2Q92539 896 aa15.89■□□□□ 0.13
PHGDH-218ENST00000641491 GNL3LQ9NVN8 582 aaKnown RBP15.89■□□□□ 0.13
PHGDH-218ENST00000641491 RIPOR2Q9Y4F9 1068 aa15.89■□□□□ 0.13
PHGDH-218ENST00000641491 TAF5LO75529 589 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 UBE4AQ14139 1066 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 TNNI3KQ59H18 835 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 CCDC158Q5M9N0 1113 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 ATG9AQ7Z3C6 839 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 LNPKQ9C0E8 428 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 GPR108Q9NPR9 543 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 FPGT-TNNI3KV9GXZ4 949 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 ANKRD31Q8N7Z5 1873 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 ZNF804BA4D1E1 1349 aa15.88■□□□□ 0.13
PHGDH-218ENST00000641491 NUCB1Q02818 461 aa15.87■□□□□ 0.13
PHGDH-218ENST00000641491 TTC39AQ5SRH9 613 aa15.87■□□□□ 0.13
PHGDH-218ENST00000641491 ZNF804AQ7Z570 1209 aa15.87■□□□□ 0.13
PHGDH-218ENST00000641491 ZC3H12CQ9C0D7 883 aaKnown RBP15.87■□□□□ 0.13
PHGDH-218ENST00000641491 COL11A2P13942 1736 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-218ENST00000641491 A0A1B0GUL7 405 aa15.86■□□□□ 0.13
PHGDH-218ENST00000641491 ERC2O15083 957 aa15.86■□□□□ 0.13
PHGDH-218ENST00000641491 SMARCA5O60264 1052 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-218ENST00000641491 GPSM2P81274 684 aa15.86■□□□□ 0.13
PHGDH-218ENST00000641491 SASH1O94885 1247 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms