RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 LRRC37AA6NMS7 1700 aa13.67□□□□□ -0.22
HNRNPU-227ENST00000640264 DUOX1Q9NRD9 1551 aa13.66□□□□□ -0.22
HNRNPU-227ENST00000640264 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
HNRNPU-227ENST00000640264 LMOD3Q0VAK6 560 aa13.66□□□□□ -0.22
HNRNPU-227ENST00000640264 EYA3Q99504 573 aa13.66□□□□□ -0.22
HNRNPU-227ENST00000640264 ADM5C9JUS6 153 aa13.65□□□□□ -0.22
HNRNPU-227ENST00000640264 ECE2O60344 883 aa13.65□□□□□ -0.22
HNRNPU-227ENST00000640264 TRPA1O75762 1119 aa13.65□□□□□ -0.22
HNRNPU-227ENST00000640264 EGFRP00533 1210 aa13.65□□□□□ -0.22
HNRNPU-227ENST00000640264 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
HNRNPU-227ENST00000640264 SULF1Q8IWU6 871 aa13.65□□□□□ -0.22
HNRNPU-227ENST00000640264 RNF186Q9NXI6 227 aa13.65□□□□□ -0.22
HNRNPU-227ENST00000640264 PDE4DIPQ5VU43 2346 aa13.65□□□□□ -0.22
HNRNPU-227ENST00000640264 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
HNRNPU-227ENST00000640264 GPSM2P81274 684 aa13.64□□□□□ -0.23
HNRNPU-227ENST00000640264 DOK7Q18PE1 504 aa13.64□□□□□ -0.23
HNRNPU-227ENST00000640264 KIF4BQ2VIQ3 1234 aa13.64□□□□□ -0.23
HNRNPU-227ENST00000640264 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
HNRNPU-227ENST00000640264 PLBD2Q8NHP8 589 aa13.64□□□□□ -0.23
HNRNPU-227ENST00000640264 CELF1Q92879 486 aaKnown RBP13.64□□□□□ -0.23
HNRNPU-227ENST00000640264 ZNF428Q96B54 188 aa13.64□□□□□ -0.23
HNRNPU-227ENST00000640264 POLLQ9UGP5 575 aa13.64□□□□□ -0.23
HNRNPU-227ENST00000640264 G3V3G9 751 aa13.63□□□□□ -0.23
HNRNPU-227ENST00000640264 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
HNRNPU-227ENST00000640264 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
HNRNPU-227ENST00000640264 FAM89AQ96GI7 184 aa13.63□□□□□ -0.23
HNRNPU-227ENST00000640264 ZC3H12CQ9C0D7 883 aaKnown RBP13.63□□□□□ -0.23
HNRNPU-227ENST00000640264 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
HNRNPU-227ENST00000640264 RTL9Q8NET4 1388 aa13.62□□□□□ -0.23
HNRNPU-227ENST00000640264 SLC10A3P09131 477 aa13.62□□□□□ -0.23
HNRNPU-227ENST00000640264 TMPOP42166 694 aaKnown RBP13.62□□□□□ -0.23
HNRNPU-227ENST00000640264 SOX10P56693 466 aa13.62□□□□□ -0.23
HNRNPU-227ENST00000640264 RPS8P62241 208 aaKnown RBP13.62□□□□□ -0.23
HNRNPU-227ENST00000640264 TBC1D16Q8TBP0 767 aa13.62□□□□□ -0.23
HNRNPU-227ENST00000640264 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
HNRNPU-227ENST00000640264 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
HNRNPU-227ENST00000640264 CHPF2Q9P2E5 772 aa13.62□□□□□ -0.23
HNRNPU-227ENST00000640264 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
HNRNPU-227ENST00000640264 VIL1P09327 827 aaKnown RBP13.61□□□□□ -0.23
HNRNPU-227ENST00000640264 RRP1P56182 461 aaKnown RBP13.61□□□□□ -0.23
HNRNPU-227ENST00000640264 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
HNRNPU-227ENST00000640264 CTU1Q7Z7A3 348 aaKnown RBP13.61□□□□□ -0.23
HNRNPU-227ENST00000640264 CDCA5Q96FF9 252 aa13.61□□□□□ -0.23
HNRNPU-227ENST00000640264 GGA3Q9NZ52 723 aa13.61□□□□□ -0.23
HNRNPU-227ENST00000640264 DBF4Q9UBU7 674 aaPredicted RBP13.61□□□□□ -0.23
HNRNPU-227ENST00000640264 CHL1O00533 1208 aa13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 IRS4O14654 1257 aaPredicted RBP13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 HSP90B1P14625 803 aaKnown RBP13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 HDGFL1Q5TGJ6 251 aa13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 CCDC146Q8IYE0 955 aa13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 ANKIB1Q9P2G1 1089 aa13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 LAS1LQ9Y4W2 734 aaKnown RBP13.6□□□□□ -0.23
HNRNPU-227ENST00000640264 UFL1O94874 794 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 HOXB7P09629 217 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 FKBP1BP68106 108 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 SCARF1Q14162 830 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 B4GALNT3Q6L9W6 998 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 AGBL3Q8NEM8 1001 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 HYPKQ9NX55 129 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 PODXL2Q9NZ53 605 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 SCN9AQ15858 1988 aa13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 ASTN2O75129 1339 aaPredicted RBP13.59□□□□□ -0.23
HNRNPU-227ENST00000640264 ZNF280AP59817 542 aaPredicted RBP13.58□□□□□ -0.24
HNRNPU-227ENST00000640264 TRIM28Q13263 835 aaKnown RBP13.58□□□□□ -0.24
HNRNPU-227ENST00000640264 ANGEL2Q5VTE6 544 aaKnown RBP13.58□□□□□ -0.24
HNRNPU-227ENST00000640264 RASAL3Q86YV0 1011 aa13.58□□□□□ -0.24
HNRNPU-227ENST00000640264 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
HNRNPU-227ENST00000640264 GGA1Q9UJY5 639 aa13.58□□□□□ -0.24
HNRNPU-227ENST00000640264 RCAN3Q9UKA8 241 aa13.58□□□□□ -0.24
HNRNPU-227ENST00000640264 PKN2Q16513 984 aaKnown RBP13.57□□□□□ -0.24
HNRNPU-227ENST00000640264 RSBN1LQ6PCB5 846 aaPredicted RBP13.57□□□□□ -0.24
HNRNPU-227ENST00000640264 HDAC9Q9UKV0 1011 aa13.57□□□□□ -0.24
HNRNPU-227ENST00000640264 COL4A1P02462 1669 aa13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 PAPPA2Q9BXP8 1791 aa13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 USP17L8P0C7I0 530 aa13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 PRPF38BQ5VTL8 546 aaKnown RBP13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 RIC3Q7Z5B4 369 aa13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 ZBTB38Q8NAP3 1195 aaPredicted RBP13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 MYOZ2Q9NPC6 264 aa13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 ZNF521Q96K83 1311 aa13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 PITPNM2Q9BZ72 1349 aa13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 ZNF609O15014 1411 aa13.56□□□□□ -0.24
HNRNPU-227ENST00000640264 GOLGA2Q08379 1002 aa13.55□□□□□ -0.24
HNRNPU-227ENST00000640264 CCDC152Q4G0S7 254 aa13.55□□□□□ -0.24
HNRNPU-227ENST00000640264 SEC31BQ9NQW1 1179 aa13.55□□□□□ -0.24
HNRNPU-227ENST00000640264 PSME4Q14997 1843 aa13.55□□□□□ -0.24
HNRNPU-227ENST00000640264 USP17L3A6NCW0 530 aa13.54□□□□□ -0.24
HNRNPU-227ENST00000640264 USP17L4A6NCW7 530 aa13.54□□□□□ -0.24
HNRNPU-227ENST00000640264 DUSP27Q5VZP5 1158 aa13.54□□□□□ -0.24
HNRNPU-227ENST00000640264 USP17L1Q7RTZ2 530 aa13.54□□□□□ -0.24
HNRNPU-227ENST00000640264 PODNQ7Z5L7 613 aa13.54□□□□□ -0.24
HNRNPU-227ENST00000640264 CCDC136Q96JN2 1154 aa13.54□□□□□ -0.24
HNRNPU-227ENST00000640264 GMLQ99445 158 aa13.54□□□□□ -0.24
HNRNPU-227ENST00000640264 ADAMTS8Q9UP79 889 aa13.54□□□□□ -0.24
HNRNPU-227ENST00000640264 TRIM35Q9UPQ4 493 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 428.4 ms