RNA–Protein interactions for RNA: ENST00000638603.1

SCARB2-211, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-211ENST00000638603 CABP4P57796 275 aa9.6□□□□□ -0.87
SCARB2-211ENST00000638603 TIMM10P62072 90 aa9.6□□□□□ -0.87
SCARB2-211ENST00000638603 ZNF396Q96N95 335 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-211ENST00000638603 SNRPA1P09661 255 aaKnown RBP9.6□□□□□ -0.87
SCARB2-211ENST00000638603 FSIP1Q8NA03 581 aa9.6□□□□□ -0.87
SCARB2-211ENST00000638603 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-211ENST00000638603 TRMT1Q9NXH9 659 aaKnown RBP9.6□□□□□ -0.87
SCARB2-211ENST00000638603 UBR1Q8IWV7 1749 aa9.6□□□□□ -0.87
SCARB2-211ENST00000638603 PTPDC1A2A3K4 754 aa9.6□□□□□ -0.87
SCARB2-211ENST00000638603 RAB11FIP4Q86YS3 637 aa9.6□□□□□ -0.87
SCARB2-211ENST00000638603 ZHX1Q9UKY1 873 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-211ENST00000638603 CPLX1O14810 134 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 SCRN1Q12765 414 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 XRN1Q8IZH2 1706 aaKnown RBP9.59□□□□□ -0.87
SCARB2-211ENST00000638603 HAND2P61296 217 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 TAF7LQ5H9L4 462 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 ZSCAN25Q6NSZ9 544 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 DHX32Q7L7V1 743 aaKnown RBP9.59□□□□□ -0.87
SCARB2-211ENST00000638603 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
SCARB2-211ENST00000638603 SLC52A2Q9HAB3 445 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 SNRKQ9NRH2 765 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 NPHP1O15259 732 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 PTPN12Q05209 780 aaKnown RBP9.59□□□□□ -0.87
SCARB2-211ENST00000638603 STK38Q15208 465 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 STX1AQ16623 288 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 PIK3C2AO00443 1686 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 FAM208AQ9UK61 1670 aaKnown RBP9.59□□□□□ -0.87
SCARB2-211ENST00000638603 POLR3DP05423 398 aaPredicted RBP9.59□□□□□ -0.87
SCARB2-211ENST00000638603 HMGB1P09429 215 aaKnown RBP9.59□□□□□ -0.87
SCARB2-211ENST00000638603 IFIT1P09914 478 aaKnown RBP9.59□□□□□ -0.87
SCARB2-211ENST00000638603 GNL2Q13823 731 aaKnown RBP9.59□□□□□ -0.87
SCARB2-211ENST00000638603 CHRNA2Q15822 529 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 ZNF710Q8N1W2 664 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 COPRSQ9NQ92 184 aa9.59□□□□□ -0.87
SCARB2-211ENST00000638603 RGPD8O14715 1765 aaPredicted RBP9.58□□□□□ -0.88
SCARB2-211ENST00000638603 SMC2O95347 1197 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 CEP57L1Q8IYX8 460 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 IFNL2Q8IZJ0 200 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 PAG1Q9NWQ8 432 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 FMN2Q9NZ56 1722 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 U2AF2P26368 475 aaKnown RBP eCLIP9.58□□□□□ -0.88
SCARB2-211ENST00000638603 RESTQ13127 1097 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 PDIA6Q15084 440 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 NAT10Q9H0A0 1025 aaKnown RBP9.58□□□□□ -0.88
SCARB2-211ENST00000638603 NALCNQ8IZF0 1738 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 OTUD7BQ6GQQ9 843 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 KBTBD3Q8NAB2 608 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 CABLES1Q8TDN4 633 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 CACTINQ8WUQ7 758 aaKnown RBP9.58□□□□□ -0.88
SCARB2-211ENST00000638603 USP28Q96RU2 1077 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 ZBTB3Q9H5J0 574 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 ANO10Q9NW15 660 aa9.58□□□□□ -0.88
SCARB2-211ENST00000638603 BIN1O00499 593 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 CTAGE5O15320 804 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 SKILP12757 684 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 SYNE3Q6ZMZ3 975 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 MED23Q9ULK4 1368 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 TOPAZ1Q8N9V7 1692 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 NRDCO43847 1150 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 C11orf57Q6ZUT1 292 aaPredicted RBP9.57□□□□□ -0.88
SCARB2-211ENST00000638603 SMAP1Q8IYB5 467 aaPredicted RBP9.57□□□□□ -0.88
SCARB2-211ENST00000638603 TDRD7Q8NHU6 1098 aaKnown RBP9.57□□□□□ -0.88
SCARB2-211ENST00000638603 CACNA1FO60840 1977 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 IGSF3O75054 1194 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 PTPN14Q15678 1187 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 RALYLQ86SE5 291 aaKnown RBP9.57□□□□□ -0.88
SCARB2-211ENST00000638603 AOPEPQ8N6M6 819 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 ZNF594Q96JF6 807 aaPredicted RBP9.57□□□□□ -0.88
SCARB2-211ENST00000638603 HAUS7Q99871 368 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 PXDNQ92626 1479 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 NWD1Q149M9 1564 aa9.57□□□□□ -0.88
SCARB2-211ENST00000638603 CAVIN2O95810 425 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 ARID5BQ14865 1188 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 CEP135Q66GS9 1140 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCARB2-211ENST00000638603 V9GYY5 206 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-211ENST00000638603 A0A1B0GVL5 298 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 APPP05067 770 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 TPM4P67936 248 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 HSP90AB3PQ58FF7 597 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 TTLL5Q6EMB2 1281 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 DDX17Q92841 729 aaKnown RBP9.56□□□□□ -0.88
SCARB2-211ENST00000638603 CEP126Q9P2H0 1117 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 ISM2Q6H9L7 571 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-211ENST00000638603 NSUN7Q8NE18 718 aaKnown RBP9.56□□□□□ -0.88
SCARB2-211ENST00000638603 CCDC69A6NI79 296 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 PFKFB2O60825 505 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 PHKG2P15735 406 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 GTF2F1P35269 517 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCARB2-211ENST00000638603 CCDC144BQ3MJ40 725 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 TTC39AQ5SRH9 613 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 STOX1Q6ZVD7 989 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 CCDC144CPQ8IYA2 1237 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 C8orf76Q96K31 380 aa9.56□□□□□ -0.88
SCARB2-211ENST00000638603 UTYO14607 1347 aa9.55□□□□□ -0.88
SCARB2-211ENST00000638603 SMTNL1A8MU46 457 aa9.55□□□□□ -0.88
SCARB2-211ENST00000638603 E7EWF7 191 aa9.55□□□□□ -0.88
SCARB2-211ENST00000638603 ATP2B3Q16720 1220 aa9.55□□□□□ -0.88
SCARB2-211ENST00000638603 TSGA10IPQ3SY00 556 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms