RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 LRIT3Q3SXY7 679 aa13.35□□□□□ -0.27
CHD2-229ENST00000637789 BCAMP50895 628 aa13.34□□□□□ -0.27
CHD2-229ENST00000637789 MTFR1Q15390 333 aa13.34□□□□□ -0.27
CHD2-229ENST00000637789 TTC28Q96AY4 2481 aa13.33□□□□□ -0.28
CHD2-229ENST00000637789 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
CHD2-229ENST00000637789 KCNQ3O43525 872 aa13.33□□□□□ -0.28
CHD2-229ENST00000637789 EVI5O60447 810 aa13.33□□□□□ -0.28
CHD2-229ENST00000637789 BMP8BP34820 402 aa13.33□□□□□ -0.28
CHD2-229ENST00000637789 TEFQ10587 303 aa13.33□□□□□ -0.28
CHD2-229ENST00000637789 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
CHD2-229ENST00000637789 GUCD1Q96NT3 240 aa13.33□□□□□ -0.28
CHD2-229ENST00000637789 GDF15Q99988 308 aa13.33□□□□□ -0.28
CHD2-229ENST00000637789 ZNF646O15015 1829 aaPredicted RBP13.33□□□□□ -0.28
CHD2-229ENST00000637789 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
CHD2-229ENST00000637789 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
CHD2-229ENST00000637789 BBOX1O75936 387 aa13.32□□□□□ -0.28
CHD2-229ENST00000637789 ZNF280AP59817 542 aaPredicted RBP13.32□□□□□ -0.28
CHD2-229ENST00000637789 PRKG1Q13976 671 aa13.32□□□□□ -0.28
CHD2-229ENST00000637789 SYMPKQ92797 1274 aaKnown RBP13.32□□□□□ -0.28
CHD2-229ENST00000637789 SNX27Q96L92 541 aa13.32□□□□□ -0.28
CHD2-229ENST00000637789 UBN2Q6ZU65 1347 aa13.32□□□□□ -0.28
CHD2-229ENST00000637789 TMEM265A0A087WTH1 108 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 RIMBP2O15034 1052 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 ECE2O60344 883 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 IL13P35225 146 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 NF2P35240 595 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 ARHGEF6Q15052 776 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 WASHC4Q2M389 1173 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 LDLRAD1Q5T700 205 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 SUSD4Q5VX71 490 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 ARMC9Q7Z3E5 817 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 NKX2-3Q8TAU0 364 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 NLRP3Q96P20 1036 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 TAF1P21675 1872 aa13.31□□□□□ -0.28
CHD2-229ENST00000637789 LAMB1P07942 1786 aa13.3□□□□□ -0.28
CHD2-229ENST00000637789 TNFRSF10AO00220 468 aa13.3□□□□□ -0.28
CHD2-229ENST00000637789 VIL1P09327 827 aaKnown RBP13.3□□□□□ -0.28
CHD2-229ENST00000637789 GPTP24298 496 aa13.3□□□□□ -0.28
CHD2-229ENST00000637789 GJA8P48165 433 aa13.3□□□□□ -0.28
CHD2-229ENST00000637789 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
CHD2-229ENST00000637789 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
CHD2-229ENST00000637789 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
CHD2-229ENST00000637789 PRUNE2Q8WUY3 3088 aa13.29□□□□□ -0.28
CHD2-229ENST00000637789 NTSR2O95665 410 aa13.29□□□□□ -0.28
CHD2-229ENST00000637789 ZBTB48P10074 688 aaPredicted RBP13.29□□□□□ -0.28
CHD2-229ENST00000637789 DDX60Q8IY21 1712 aaKnown RBP13.29□□□□□ -0.28
CHD2-229ENST00000637789 IRS2Q9Y4H2 1338 aa13.29□□□□□ -0.28
CHD2-229ENST00000637789 NUP98P52948 1817 aa13.28□□□□□ -0.28
CHD2-229ENST00000637789 FARP2O94887 1054 aaPredicted RBP13.28□□□□□ -0.28
CHD2-229ENST00000637789 HMOX1P09601 288 aa13.28□□□□□ -0.28
CHD2-229ENST00000637789 MAP3K12Q12852 859 aa13.28□□□□□ -0.28
CHD2-229ENST00000637789 OTUD7BQ6GQQ9 843 aa13.28□□□□□ -0.28
CHD2-229ENST00000637789 SLC10A4Q96EP9 437 aa13.28□□□□□ -0.28
CHD2-229ENST00000637789 WNK4Q96J92 1243 aa13.28□□□□□ -0.28
CHD2-229ENST00000637789 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
CHD2-229ENST00000637789 ANGEL1Q9UNK9 670 aaKnown RBP13.28□□□□□ -0.28
CHD2-229ENST00000637789 FZD1Q9UP38 647 aa13.28□□□□□ -0.28
CHD2-229ENST00000637789 SCN9AQ15858 1988 aa13.28□□□□□ -0.28
CHD2-229ENST00000637789 ZSWIM8A7E2V4 1837 aa13.27□□□□□ -0.28
CHD2-229ENST00000637789 GJB1P08034 283 aa13.27□□□□□ -0.29
CHD2-229ENST00000637789 TDHQ8IZJ6 230 aa13.27□□□□□ -0.29
CHD2-229ENST00000637789 PTPN18Q99952 460 aa13.27□□□□□ -0.29
CHD2-229ENST00000637789 LRRC37AA6NMS7 1700 aa13.26□□□□□ -0.29
CHD2-229ENST00000637789 ERVV-1B6SEH8 477 aa13.26□□□□□ -0.29
CHD2-229ENST00000637789 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
CHD2-229ENST00000637789 CDCA8Q53HL2 280 aa13.26□□□□□ -0.29
CHD2-229ENST00000637789 FAM161BQ96MY7 647 aa13.26□□□□□ -0.29
CHD2-229ENST00000637789 SYNGAP1Q96PV0 1343 aa13.26□□□□□ -0.29
CHD2-229ENST00000637789 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
CHD2-229ENST00000637789 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
CHD2-229ENST00000637789 ECM2O94769 699 aaPredicted RBP13.25□□□□□ -0.29
CHD2-229ENST00000637789 SNRPA1P09661 255 aaKnown RBP13.25□□□□□ -0.29
CHD2-229ENST00000637789 AGBL3Q8NEM8 1001 aa13.25□□□□□ -0.29
CHD2-229ENST00000637789 MAFAQ8NHW3 353 aaPredicted RBP13.25□□□□□ -0.29
CHD2-229ENST00000637789 NECTIN2Q92692 538 aa13.25□□□□□ -0.29
CHD2-229ENST00000637789 CLMNQ96JQ2 1002 aa13.25□□□□□ -0.29
CHD2-229ENST00000637789 ARHGAP39Q9C0H5 1083 aa13.25□□□□□ -0.29
CHD2-229ENST00000637789 LAMB2P55268 1798 aa13.25□□□□□ -0.29
CHD2-229ENST00000637789 LAMA2P24043 3122 aaKnown RBP13.24□□□□□ -0.29
CHD2-229ENST00000637789 MAP3K15Q6ZN16 1313 aa13.24□□□□□ -0.29
CHD2-229ENST00000637789 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
CHD2-229ENST00000637789 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
CHD2-229ENST00000637789 CCL5P13501 91 aa13.24□□□□□ -0.29
CHD2-229ENST00000637789 GRAPQ13588 217 aa13.24□□□□□ -0.29
CHD2-229ENST00000637789 SLC10A5Q5PT55 438 aa13.24□□□□□ -0.29
CHD2-229ENST00000637789 FAM109BQ6ICB4 259 aaPredicted RBP13.24□□□□□ -0.29
CHD2-229ENST00000637789 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
CHD2-229ENST00000637789 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
CHD2-229ENST00000637789 GRAPLQ8TC17 118 aaPredicted RBP13.24□□□□□ -0.29
CHD2-229ENST00000637789 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
CHD2-229ENST00000637789 NSFL1CQ9UNZ2 370 aaKnown RBP13.24□□□□□ -0.29
CHD2-229ENST00000637789 ALPK3Q96L96 1907 aa13.23□□□□□ -0.29
CHD2-229ENST00000637789 ZNF34Q8IZ26 560 aa13.23□□□□□ -0.29
CHD2-229ENST00000637789 U2AF1L4Q8WU68 220 aaKnown RBP13.23□□□□□ -0.29
CHD2-229ENST00000637789 ZMYND8Q9ULU4 1186 aaPredicted RBP13.23□□□□□ -0.29
CHD2-229ENST00000637789 SSC5DA1L4H1 1573 aa13.23□□□□□ -0.29
CHD2-229ENST00000637789 TESPA1A2RU30 521 aaPredicted RBP13.22□□□□□ -0.29
CHD2-229ENST00000637789 GJA5P36382 358 aa13.22□□□□□ -0.29
CHD2-229ENST00000637789 TTLL7Q6ZT98 887 aa13.22□□□□□ -0.29
CHD2-229ENST00000637789 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 237.6 ms